Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb17Q91VD8 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb17Q91VD8 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb17Q91VD8 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb17Q91VD8 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Pcdhb17Q91VD8 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdhb17Q91VD8 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Pcdhb17Q91VD8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb17Q91VD8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb17Q91VD8 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhb17Q91VD8 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb17Q91VD8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhb17Q91VD8 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb17Q91VD8 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdhb17Q91VD8 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdhb17Q91VD8 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb17Q91VD8 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb17Q91VD8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb17Q91VD8 Gm42535-201ENSMUST00000197312 1399 ntBASIC17.17■□□□□ 0.34
Pcdhb17Q91VD8 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhb17Q91VD8 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhb17Q91VD8 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb17Q91VD8 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb17Q91VD8 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb17Q91VD8 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.17■□□□□ 0.34
Pcdhb17Q91VD8 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb17Q91VD8 Gm37641-201ENSMUST00000193837 239 ntBASIC17.17■□□□□ 0.34
Pcdhb17Q91VD8 Gm43692-201ENSMUST00000198236 1062 ntBASIC17.17■□□□□ 0.34
Pcdhb17Q91VD8 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.17■□□□□ 0.34
Pcdhb17Q91VD8 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb17Q91VD8 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Pcdhb17Q91VD8 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Pcdhb17Q91VD8 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb17Q91VD8 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb17Q91VD8 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhb17Q91VD8 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb17Q91VD8 Gm45657-201ENSMUST00000211318 1349 ntBASIC17.17■□□□□ 0.34
Pcdhb17Q91VD8 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb17Q91VD8 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.17■□□□□ 0.34
Pcdhb17Q91VD8 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhb17Q91VD8 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb17Q91VD8 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhb17Q91VD8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb17Q91VD8 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb17Q91VD8 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhb17Q91VD8 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhb17Q91VD8 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.16■□□□□ 0.34
Pcdhb17Q91VD8 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.16■□□□□ 0.34
Pcdhb17Q91VD8 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC17.16■□□□□ 0.34
Pcdhb17Q91VD8 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC17.16■□□□□ 0.34
Pcdhb17Q91VD8 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Pcdhb17Q91VD8 AC132446.1-201ENSMUST00000222655 226 ntBASIC17.16■□□□□ 0.34
Pcdhb17Q91VD8 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb17Q91VD8 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb17Q91VD8 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb17Q91VD8 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhb17Q91VD8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhb17Q91VD8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb17Q91VD8 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb17Q91VD8 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb17Q91VD8 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb17Q91VD8 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb17Q91VD8 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Pcdhb17Q91VD8 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb17Q91VD8 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb17Q91VD8 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb17Q91VD8 Gm6345-202ENSMUST00000180900 204 ntBASIC17.15■□□□□ 0.34
Pcdhb17Q91VD8 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdhb17Q91VD8 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb17Q91VD8 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb17Q91VD8 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb17Q91VD8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb17Q91VD8 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb17Q91VD8 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb17Q91VD8 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb17Q91VD8 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Pcdhb17Q91VD8 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
Pcdhb17Q91VD8 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb17Q91VD8 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb17Q91VD8 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb17Q91VD8 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb17Q91VD8 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb17Q91VD8 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb17Q91VD8 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb17Q91VD8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb17Q91VD8 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb17Q91VD8 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb17Q91VD8 Mir770-201ENSMUST00000103252 94 ntBASIC17.14■□□□□ 0.33
Pcdhb17Q91VD8 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Pcdhb17Q91VD8 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb17Q91VD8 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.14■□□□□ 0.33
Pcdhb17Q91VD8 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.14■□□□□ 0.33
Pcdhb17Q91VD8 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC17.14■□□□□ 0.33
Pcdhb17Q91VD8 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC17.14■□□□□ 0.33
Pcdhb17Q91VD8 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb17Q91VD8 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb17Q91VD8 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Pcdhb17Q91VD8 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb17Q91VD8 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb17Q91VD8 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms