Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Vsx1Q91V10 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.35■□□□□ 0.21
Vsx1Q91V10 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Vsx1Q91V10 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vsx1Q91V10 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vsx1Q91V10 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vsx1Q91V10 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vsx1Q91V10 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vsx1Q91V10 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.34■□□□□ 0.21
Vsx1Q91V10 Gm15467-201ENSMUST00000120582 445 ntBASIC16.34■□□□□ 0.21
Vsx1Q91V10 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.34■□□□□ 0.21
Vsx1Q91V10 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.34■□□□□ 0.21
Vsx1Q91V10 Mir5126-201ENSMUST00000175513 77 ntBASIC16.34■□□□□ 0.21
Vsx1Q91V10 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Vsx1Q91V10 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vsx1Q91V10 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vsx1Q91V10 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.34■□□□□ 0.21
Vsx1Q91V10 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.34■□□□□ 0.21
Vsx1Q91V10 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vsx1Q91V10 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vsx1Q91V10 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Vsx1Q91V10 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Vsx1Q91V10 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vsx1Q91V10 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.34■□□□□ 0.21
Vsx1Q91V10 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vsx1Q91V10 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vsx1Q91V10 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vsx1Q91V10 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.34■□□□□ 0.21
Vsx1Q91V10 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vsx1Q91V10 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Vsx1Q91V10 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Vsx1Q91V10 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Vsx1Q91V10 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Vsx1Q91V10 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.33■□□□□ 0.2
Vsx1Q91V10 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Vsx1Q91V10 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vsx1Q91V10 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Vsx1Q91V10 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vsx1Q91V10 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Vsx1Q91V10 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vsx1Q91V10 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vsx1Q91V10 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vsx1Q91V10 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vsx1Q91V10 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vsx1Q91V10 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.33■□□□□ 0.2
Vsx1Q91V10 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.33■□□□□ 0.2
Vsx1Q91V10 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vsx1Q91V10 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vsx1Q91V10 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vsx1Q91V10 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vsx1Q91V10 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vsx1Q91V10 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Vsx1Q91V10 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vsx1Q91V10 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vsx1Q91V10 Gm4995-201ENSMUST00000117247 432 ntBASIC16.32■□□□□ 0.2
Vsx1Q91V10 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Vsx1Q91V10 Rprl3-201ENSMUST00000157400 290 ntBASIC16.32■□□□□ 0.2
Vsx1Q91V10 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.32■□□□□ 0.2
Vsx1Q91V10 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vsx1Q91V10 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.32■□□□□ 0.2
Vsx1Q91V10 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vsx1Q91V10 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.32■□□□□ 0.2
Vsx1Q91V10 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Vsx1Q91V10 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Vsx1Q91V10 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vsx1Q91V10 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vsx1Q91V10 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vsx1Q91V10 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vsx1Q91V10 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vsx1Q91V10 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vsx1Q91V10 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vsx1Q91V10 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vsx1Q91V10 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vsx1Q91V10 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vsx1Q91V10 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vsx1Q91V10 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vsx1Q91V10 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vsx1Q91V10 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vsx1Q91V10 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vsx1Q91V10 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vsx1Q91V10 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vsx1Q91V10 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.31■□□□□ 0.2
Vsx1Q91V10 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Vsx1Q91V10 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.31■□□□□ 0.2
Vsx1Q91V10 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vsx1Q91V10 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.31■□□□□ 0.2
Vsx1Q91V10 Mir8112-201ENSMUST00000184382 131 ntBASIC16.31■□□□□ 0.2
Vsx1Q91V10 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.31■□□□□ 0.2
Vsx1Q91V10 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.31■□□□□ 0.2
Vsx1Q91V10 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vsx1Q91V10 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vsx1Q91V10 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vsx1Q91V10 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vsx1Q91V10 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vsx1Q91V10 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vsx1Q91V10 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vsx1Q91V10 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Vsx1Q91V10 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Vsx1Q91V10 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vsx1Q91V10 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms