Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
StrcQ8VIM6 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
StrcQ8VIM6 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
StrcQ8VIM6 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
StrcQ8VIM6 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
StrcQ8VIM6 Gm43125-201ENSMUST00000201724 730 ntBASIC19.69■□□□□ 0.74
StrcQ8VIM6 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
StrcQ8VIM6 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
StrcQ8VIM6 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
StrcQ8VIM6 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.69■□□□□ 0.74
StrcQ8VIM6 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
StrcQ8VIM6 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
StrcQ8VIM6 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
StrcQ8VIM6 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC19.68■□□□□ 0.74
StrcQ8VIM6 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
StrcQ8VIM6 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
StrcQ8VIM6 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
StrcQ8VIM6 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
StrcQ8VIM6 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
StrcQ8VIM6 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
StrcQ8VIM6 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
StrcQ8VIM6 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC19.67■□□□□ 0.74
StrcQ8VIM6 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
StrcQ8VIM6 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC19.67■□□□□ 0.74
StrcQ8VIM6 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
StrcQ8VIM6 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.67■□□□□ 0.74
StrcQ8VIM6 AC132265.1-201ENSMUST00000219233 1665 ntBASIC19.67■□□□□ 0.74
StrcQ8VIM6 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
StrcQ8VIM6 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
StrcQ8VIM6 Gm13332-201ENSMUST00000120451 1398 ntBASIC19.67■□□□□ 0.74
StrcQ8VIM6 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
StrcQ8VIM6 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
StrcQ8VIM6 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC19.67■□□□□ 0.74
StrcQ8VIM6 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
StrcQ8VIM6 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC19.67■□□□□ 0.74
StrcQ8VIM6 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC19.67■□□□□ 0.74
StrcQ8VIM6 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC19.67■□□□□ 0.74
StrcQ8VIM6 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
StrcQ8VIM6 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
StrcQ8VIM6 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
StrcQ8VIM6 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
StrcQ8VIM6 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
StrcQ8VIM6 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
StrcQ8VIM6 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
StrcQ8VIM6 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.66■□□□□ 0.74
StrcQ8VIM6 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
StrcQ8VIM6 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
StrcQ8VIM6 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC19.66■□□□□ 0.74
StrcQ8VIM6 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC19.66■□□□□ 0.74
StrcQ8VIM6 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
StrcQ8VIM6 AA543401-201ENSMUST00000164248 1269 ntBASIC19.66■□□□□ 0.74
StrcQ8VIM6 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
StrcQ8VIM6 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
StrcQ8VIM6 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
StrcQ8VIM6 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC19.66■□□□□ 0.74
StrcQ8VIM6 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
StrcQ8VIM6 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
StrcQ8VIM6 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
StrcQ8VIM6 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
StrcQ8VIM6 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
StrcQ8VIM6 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC19.65■□□□□ 0.74
StrcQ8VIM6 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
StrcQ8VIM6 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
StrcQ8VIM6 Gm45612-201ENSMUST00000211320 160 ntBASIC19.65■□□□□ 0.74
StrcQ8VIM6 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
StrcQ8VIM6 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
StrcQ8VIM6 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
StrcQ8VIM6 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
StrcQ8VIM6 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
StrcQ8VIM6 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.65■□□□□ 0.74
StrcQ8VIM6 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
StrcQ8VIM6 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.64■□□□□ 0.74
StrcQ8VIM6 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
StrcQ8VIM6 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
StrcQ8VIM6 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
StrcQ8VIM6 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
StrcQ8VIM6 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
StrcQ8VIM6 Gm15427-201ENSMUST00000117288 531 ntBASIC19.64■□□□□ 0.73
StrcQ8VIM6 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC19.64■□□□□ 0.73
StrcQ8VIM6 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC19.64■□□□□ 0.73
StrcQ8VIM6 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
StrcQ8VIM6 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC19.64■□□□□ 0.73
StrcQ8VIM6 Gm5177-201ENSMUST00000183092 997 ntBASIC19.64■□□□□ 0.73
StrcQ8VIM6 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
StrcQ8VIM6 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC19.64■□□□□ 0.73
StrcQ8VIM6 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
StrcQ8VIM6 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
StrcQ8VIM6 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
StrcQ8VIM6 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
StrcQ8VIM6 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
StrcQ8VIM6 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
StrcQ8VIM6 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
StrcQ8VIM6 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
StrcQ8VIM6 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
StrcQ8VIM6 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
StrcQ8VIM6 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
StrcQ8VIM6 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC19.63■□□□□ 0.73
StrcQ8VIM6 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
StrcQ8VIM6 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
StrcQ8VIM6 Gm11745-201ENSMUST00000121669 448 ntBASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms