Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TraipQ8VIG6 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.55■□□□□ 0.4
TraipQ8VIG6 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TraipQ8VIG6 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TraipQ8VIG6 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TraipQ8VIG6 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TraipQ8VIG6 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TraipQ8VIG6 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TraipQ8VIG6 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.55■□□□□ 0.4
TraipQ8VIG6 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.55■□□□□ 0.4
TraipQ8VIG6 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TraipQ8VIG6 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.55■□□□□ 0.4
TraipQ8VIG6 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TraipQ8VIG6 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TraipQ8VIG6 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TraipQ8VIG6 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.55■□□□□ 0.4
TraipQ8VIG6 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TraipQ8VIG6 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.55■□□□□ 0.4
TraipQ8VIG6 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.55■□□□□ 0.4
TraipQ8VIG6 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TraipQ8VIG6 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TraipQ8VIG6 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.55■□□□□ 0.4
TraipQ8VIG6 Gm7461-201ENSMUST00000058918 827 ntBASIC17.55■□□□□ 0.4
TraipQ8VIG6 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TraipQ8VIG6 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TraipQ8VIG6 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TraipQ8VIG6 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TraipQ8VIG6 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TraipQ8VIG6 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.55■□□□□ 0.4
TraipQ8VIG6 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TraipQ8VIG6 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TraipQ8VIG6 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TraipQ8VIG6 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TraipQ8VIG6 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TraipQ8VIG6 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TraipQ8VIG6 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TraipQ8VIG6 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TraipQ8VIG6 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TraipQ8VIG6 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TraipQ8VIG6 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TraipQ8VIG6 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.54■□□□□ 0.4
TraipQ8VIG6 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TraipQ8VIG6 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.54■□□□□ 0.4
TraipQ8VIG6 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TraipQ8VIG6 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.54■□□□□ 0.4
TraipQ8VIG6 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.54■□□□□ 0.4
TraipQ8VIG6 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.54■□□□□ 0.4
TraipQ8VIG6 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.54■□□□□ 0.4
TraipQ8VIG6 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TraipQ8VIG6 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TraipQ8VIG6 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TraipQ8VIG6 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.54■□□□□ 0.4
TraipQ8VIG6 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TraipQ8VIG6 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TraipQ8VIG6 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TraipQ8VIG6 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.54■□□□□ 0.4
TraipQ8VIG6 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TraipQ8VIG6 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
TraipQ8VIG6 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TraipQ8VIG6 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TraipQ8VIG6 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.53■□□□□ 0.4
TraipQ8VIG6 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TraipQ8VIG6 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TraipQ8VIG6 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TraipQ8VIG6 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.53■□□□□ 0.4
TraipQ8VIG6 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.53■□□□□ 0.4
TraipQ8VIG6 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TraipQ8VIG6 Rps4l-201ENSMUST00000071745 943 ntBASIC17.53■□□□□ 0.4
TraipQ8VIG6 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TraipQ8VIG6 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TraipQ8VIG6 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TraipQ8VIG6 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TraipQ8VIG6 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TraipQ8VIG6 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TraipQ8VIG6 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.53■□□□□ 0.4
TraipQ8VIG6 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
TraipQ8VIG6 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TraipQ8VIG6 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TraipQ8VIG6 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.52■□□□□ 0.4
TraipQ8VIG6 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TraipQ8VIG6 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
TraipQ8VIG6 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TraipQ8VIG6 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TraipQ8VIG6 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TraipQ8VIG6 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TraipQ8VIG6 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TraipQ8VIG6 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.52■□□□□ 0.4
TraipQ8VIG6 Gm13884-201ENSMUST00000118103 829 ntBASIC17.52■□□□□ 0.4
TraipQ8VIG6 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.52■□□□□ 0.4
TraipQ8VIG6 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.52■□□□□ 0.4
TraipQ8VIG6 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
TraipQ8VIG6 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.52■□□□□ 0.4
TraipQ8VIG6 Mzt1-203ENSMUST00000227948 952 ntBASIC17.52■□□□□ 0.4
TraipQ8VIG6 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TraipQ8VIG6 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TraipQ8VIG6 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TraipQ8VIG6 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TraipQ8VIG6 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TraipQ8VIG6 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
TraipQ8VIG6 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms