Protein–RNA interactions for Protein: Q8VEG0

Ccdc71, Coiled-coil domain-containing protein 71, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71Q8VEG0 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc71Q8VEG0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ccdc71Q8VEG0 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc71Q8VEG0 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.1■□□□□ 0.33
Ccdc71Q8VEG0 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc71Q8VEG0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc71Q8VEG0 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.1■□□□□ 0.33
Ccdc71Q8VEG0 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.1■□□□□ 0.33
Ccdc71Q8VEG0 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc71Q8VEG0 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.1■□□□□ 0.33
Ccdc71Q8VEG0 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc71Q8VEG0 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ccdc71Q8VEG0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc71Q8VEG0 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc71Q8VEG0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc71Q8VEG0 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc71Q8VEG0 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc71Q8VEG0 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc71Q8VEG0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.1■□□□□ 0.33
Ccdc71Q8VEG0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.1■□□□□ 0.33
Ccdc71Q8VEG0 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.1■□□□□ 0.33
Ccdc71Q8VEG0 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.1■□□□□ 0.33
Ccdc71Q8VEG0 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc71Q8VEG0 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc71Q8VEG0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc71Q8VEG0 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc71Q8VEG0 Gm11779-201ENSMUST00000118541 368 ntBASIC17.09■□□□□ 0.33
Ccdc71Q8VEG0 Gm11594-201ENSMUST00000122313 162 ntBASIC17.09■□□□□ 0.33
Ccdc71Q8VEG0 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.09■□□□□ 0.33
Ccdc71Q8VEG0 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.09■□□□□ 0.33
Ccdc71Q8VEG0 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Ccdc71Q8VEG0 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.09■□□□□ 0.33
Ccdc71Q8VEG0 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.09■□□□□ 0.33
Ccdc71Q8VEG0 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc71Q8VEG0 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.09■□□□□ 0.33
Ccdc71Q8VEG0 Psmb5-202ENSMUST00000227257 622 ntBASIC17.09■□□□□ 0.33
Ccdc71Q8VEG0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc71Q8VEG0 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc71Q8VEG0 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc71Q8VEG0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc71Q8VEG0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc71Q8VEG0 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc71Q8VEG0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc71Q8VEG0 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc71Q8VEG0 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ccdc71Q8VEG0 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc71Q8VEG0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc71Q8VEG0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc71Q8VEG0 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc71Q8VEG0 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc71Q8VEG0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc71Q8VEG0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc71Q8VEG0 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc71Q8VEG0 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc71Q8VEG0 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc71Q8VEG0 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc71Q8VEG0 Gm8097-201ENSMUST00000117903 829 ntBASIC17.08■□□□□ 0.32
Ccdc71Q8VEG0 Gm4459-201ENSMUST00000118750 468 ntBASIC17.08■□□□□ 0.32
Ccdc71Q8VEG0 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc71Q8VEG0 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.08■□□□□ 0.32
Ccdc71Q8VEG0 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc71Q8VEG0 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Ccdc71Q8VEG0 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Ccdc71Q8VEG0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Ccdc71Q8VEG0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc71Q8VEG0 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc71Q8VEG0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ccdc71Q8VEG0 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc71Q8VEG0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Ccdc71Q8VEG0 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc71Q8VEG0 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc71Q8VEG0 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc71Q8VEG0 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ccdc71Q8VEG0 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc71Q8VEG0 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc71Q8VEG0 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc71Q8VEG0 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.07■□□□□ 0.32
Ccdc71Q8VEG0 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.07■□□□□ 0.32
Ccdc71Q8VEG0 Gm36967-201ENSMUST00000193814 266 ntBASIC17.07■□□□□ 0.32
Ccdc71Q8VEG0 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
Ccdc71Q8VEG0 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc71Q8VEG0 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc71Q8VEG0 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc71Q8VEG0 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Ccdc71Q8VEG0 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc71Q8VEG0 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Ccdc71Q8VEG0 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc71Q8VEG0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc71Q8VEG0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc71Q8VEG0 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc71Q8VEG0 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc71Q8VEG0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ccdc71Q8VEG0 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc71Q8VEG0 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.06■□□□□ 0.32
Ccdc71Q8VEG0 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc71Q8VEG0 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc71Q8VEG0 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc71Q8VEG0 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc71Q8VEG0 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.06■□□□□ 0.32
Ccdc71Q8VEG0 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms