Protein–RNA interactions for Protein: Q8VDB9

Slc6a20a, Sodium- and chloride-dependent transporter XTRP3A, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20aQ8VDB9 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.34■□□□□ 0.21
Slc6a20aQ8VDB9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Slc6a20aQ8VDB9 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Slc6a20aQ8VDB9 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc6a20aQ8VDB9 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.34■□□□□ 0.21
Slc6a20aQ8VDB9 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Slc6a20aQ8VDB9 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Slc6a20aQ8VDB9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Slc6a20aQ8VDB9 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Slc6a20aQ8VDB9 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Slc6a20aQ8VDB9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Slc6a20aQ8VDB9 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.21
Slc6a20aQ8VDB9 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Slc6a20aQ8VDB9 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a20aQ8VDB9 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a20aQ8VDB9 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a20aQ8VDB9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.33■□□□□ 0.2
Slc6a20aQ8VDB9 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a20aQ8VDB9 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a20aQ8VDB9 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a20aQ8VDB9 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a20aQ8VDB9 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a20aQ8VDB9 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a20aQ8VDB9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a20aQ8VDB9 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a20aQ8VDB9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a20aQ8VDB9 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.33■□□□□ 0.2
Slc6a20aQ8VDB9 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a20aQ8VDB9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Slc6a20aQ8VDB9 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a20aQ8VDB9 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a20aQ8VDB9 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a20aQ8VDB9 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a20aQ8VDB9 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Slc6a20aQ8VDB9 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a20aQ8VDB9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a20aQ8VDB9 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Slc6a20aQ8VDB9 Gm13474-201ENSMUST00000122466 815 ntBASIC16.32■□□□□ 0.2
Slc6a20aQ8VDB9 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
Slc6a20aQ8VDB9 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.32■□□□□ 0.2
Slc6a20aQ8VDB9 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a20aQ8VDB9 Actl10-202ENSMUST00000226583 1501 ntBASIC16.32■□□□□ 0.2
Slc6a20aQ8VDB9 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a20aQ8VDB9 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a20aQ8VDB9 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a20aQ8VDB9 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a20aQ8VDB9 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a20aQ8VDB9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Slc6a20aQ8VDB9 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Slc6a20aQ8VDB9 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a20aQ8VDB9 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a20aQ8VDB9 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a20aQ8VDB9 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a20aQ8VDB9 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a20aQ8VDB9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a20aQ8VDB9 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.31■□□□□ 0.2
Slc6a20aQ8VDB9 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Slc6a20aQ8VDB9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Slc6a20aQ8VDB9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Slc6a20aQ8VDB9 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.31■□□□□ 0.2
Slc6a20aQ8VDB9 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.31■□□□□ 0.2
Slc6a20aQ8VDB9 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.31■□□□□ 0.2
Slc6a20aQ8VDB9 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.31■□□□□ 0.2
Slc6a20aQ8VDB9 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.31■□□□□ 0.2
Slc6a20aQ8VDB9 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Slc6a20aQ8VDB9 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Slc6a20aQ8VDB9 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a20aQ8VDB9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a20aQ8VDB9 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a20aQ8VDB9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a20aQ8VDB9 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a20aQ8VDB9 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a20aQ8VDB9 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a20aQ8VDB9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.3■□□□□ 0.2
Slc6a20aQ8VDB9 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.3■□□□□ 0.2
Slc6a20aQ8VDB9 Gm7213-201ENSMUST00000215977 950 ntBASIC16.3■□□□□ 0.2
Slc6a20aQ8VDB9 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a20aQ8VDB9 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a20aQ8VDB9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Slc6a20aQ8VDB9 Gm10566-201ENSMUST00000086739 996 ntBASIC16.3■□□□□ 0.2
Slc6a20aQ8VDB9 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a20aQ8VDB9 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a20aQ8VDB9 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Slc6a20aQ8VDB9 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a20aQ8VDB9 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a20aQ8VDB9 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a20aQ8VDB9 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a20aQ8VDB9 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a20aQ8VDB9 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a20aQ8VDB9 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a20aQ8VDB9 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Slc6a20aQ8VDB9 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Slc6a20aQ8VDB9 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a20aQ8VDB9 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a20aQ8VDB9 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a20aQ8VDB9 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a20aQ8VDB9 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Slc6a20aQ8VDB9 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a20aQ8VDB9 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Slc6a20aQ8VDB9 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms