Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rpap2Q8VC34 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpap2Q8VC34 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpap2Q8VC34 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpap2Q8VC34 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.16■□□□□ 0.5
Rpap2Q8VC34 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpap2Q8VC34 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.16■□□□□ 0.5
Rpap2Q8VC34 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rpap2Q8VC34 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rpap2Q8VC34 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpap2Q8VC34 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rpap2Q8VC34 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpap2Q8VC34 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Rpap2Q8VC34 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpap2Q8VC34 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpap2Q8VC34 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpap2Q8VC34 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpap2Q8VC34 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpap2Q8VC34 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpap2Q8VC34 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Rpap2Q8VC34 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
Rpap2Q8VC34 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rpap2Q8VC34 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.15■□□□□ 0.5
Rpap2Q8VC34 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Rpap2Q8VC34 Gm9013-201ENSMUST00000132939 882 ntBASIC18.15■□□□□ 0.5
Rpap2Q8VC34 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.15■□□□□ 0.5
Rpap2Q8VC34 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.15■□□□□ 0.5
Rpap2Q8VC34 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rpap2Q8VC34 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rpap2Q8VC34 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.15■□□□□ 0.5
Rpap2Q8VC34 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpap2Q8VC34 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpap2Q8VC34 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpap2Q8VC34 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Rpap2Q8VC34 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Rpap2Q8VC34 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Rpap2Q8VC34 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rpap2Q8VC34 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Rpap2Q8VC34 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rpap2Q8VC34 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rpap2Q8VC34 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rpap2Q8VC34 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rpap2Q8VC34 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rpap2Q8VC34 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rpap2Q8VC34 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rpap2Q8VC34 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.14■□□□□ 0.49
Rpap2Q8VC34 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.14■□□□□ 0.49
Rpap2Q8VC34 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rpap2Q8VC34 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rpap2Q8VC34 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Rpap2Q8VC34 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rpap2Q8VC34 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Rpap2Q8VC34 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rpap2Q8VC34 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rpap2Q8VC34 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rpap2Q8VC34 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rpap2Q8VC34 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpap2Q8VC34 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpap2Q8VC34 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpap2Q8VC34 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.13■□□□□ 0.49
Rpap2Q8VC34 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpap2Q8VC34 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rpap2Q8VC34 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.13■□□□□ 0.49
Rpap2Q8VC34 Gm6659-201ENSMUST00000174752 547 ntBASIC18.13■□□□□ 0.49
Rpap2Q8VC34 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.13■□□□□ 0.49
Rpap2Q8VC34 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rpap2Q8VC34 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Rpap2Q8VC34 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Rpap2Q8VC34 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Rpap2Q8VC34 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpap2Q8VC34 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
Rpap2Q8VC34 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Rpap2Q8VC34 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rpap2Q8VC34 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpap2Q8VC34 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpap2Q8VC34 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rpap2Q8VC34 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rpap2Q8VC34 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rpap2Q8VC34 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.12■□□□□ 0.49
Rpap2Q8VC34 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rpap2Q8VC34 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rpap2Q8VC34 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rpap2Q8VC34 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rpap2Q8VC34 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rpap2Q8VC34 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.12■□□□□ 0.49
Rpap2Q8VC34 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.12■□□□□ 0.49
Rpap2Q8VC34 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rpap2Q8VC34 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.12■□□□□ 0.49
Rpap2Q8VC34 Gm5587-201ENSMUST00000206270 674 ntBASIC18.12■□□□□ 0.49
Rpap2Q8VC34 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rpap2Q8VC34 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.12■□□□□ 0.49
Rpap2Q8VC34 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rpap2Q8VC34 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rpap2Q8VC34 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rpap2Q8VC34 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Rpap2Q8VC34 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Rpap2Q8VC34 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rpap2Q8VC34 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rpap2Q8VC34 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rpap2Q8VC34 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms