Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Atp2a1Q8R429 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atp2a1Q8R429 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atp2a1Q8R429 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Atp2a1Q8R429 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atp2a1Q8R429 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atp2a1Q8R429 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atp2a1Q8R429 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Atp2a1Q8R429 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atp2a1Q8R429 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Atp2a1Q8R429 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atp2a1Q8R429 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atp2a1Q8R429 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atp2a1Q8R429 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Atp2a1Q8R429 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Atp2a1Q8R429 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Atp2a1Q8R429 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atp2a1Q8R429 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
Atp2a1Q8R429 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Atp2a1Q8R429 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Atp2a1Q8R429 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.46■□□□□ 0.55
Atp2a1Q8R429 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atp2a1Q8R429 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atp2a1Q8R429 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Atp2a1Q8R429 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atp2a1Q8R429 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atp2a1Q8R429 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atp2a1Q8R429 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Atp2a1Q8R429 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.45■□□□□ 0.54
Atp2a1Q8R429 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atp2a1Q8R429 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atp2a1Q8R429 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atp2a1Q8R429 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Atp2a1Q8R429 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.45■□□□□ 0.54
Atp2a1Q8R429 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atp2a1Q8R429 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Atp2a1Q8R429 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atp2a1Q8R429 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Atp2a1Q8R429 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atp2a1Q8R429 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.45■□□□□ 0.54
Atp2a1Q8R429 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Atp2a1Q8R429 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.45■□□□□ 0.54
Atp2a1Q8R429 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.45■□□□□ 0.54
Atp2a1Q8R429 Gm27459-201ENSMUST00000184860 107 ntBASIC18.45■□□□□ 0.54
Atp2a1Q8R429 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.45■□□□□ 0.54
Atp2a1Q8R429 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atp2a1Q8R429 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atp2a1Q8R429 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Atp2a1Q8R429 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atp2a1Q8R429 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atp2a1Q8R429 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atp2a1Q8R429 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.45■□□□□ 0.54
Atp2a1Q8R429 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Atp2a1Q8R429 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Atp2a1Q8R429 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Atp2a1Q8R429 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Atp2a1Q8R429 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Atp2a1Q8R429 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Atp2a1Q8R429 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Atp2a1Q8R429 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Atp2a1Q8R429 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.44■□□□□ 0.54
Atp2a1Q8R429 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.44■□□□□ 0.54
Atp2a1Q8R429 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Atp2a1Q8R429 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Atp2a1Q8R429 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Atp2a1Q8R429 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Atp2a1Q8R429 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Atp2a1Q8R429 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Atp2a1Q8R429 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Atp2a1Q8R429 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Atp2a1Q8R429 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atp2a1Q8R429 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atp2a1Q8R429 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atp2a1Q8R429 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atp2a1Q8R429 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Atp2a1Q8R429 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Atp2a1Q8R429 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atp2a1Q8R429 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atp2a1Q8R429 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atp2a1Q8R429 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atp2a1Q8R429 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Atp2a1Q8R429 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atp2a1Q8R429 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atp2a1Q8R429 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Atp2a1Q8R429 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atp2a1Q8R429 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atp2a1Q8R429 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atp2a1Q8R429 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atp2a1Q8R429 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Atp2a1Q8R429 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atp2a1Q8R429 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atp2a1Q8R429 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atp2a1Q8R429 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.42■□□□□ 0.54
Atp2a1Q8R429 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Atp2a1Q8R429 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Atp2a1Q8R429 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atp2a1Q8R429 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atp2a1Q8R429 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atp2a1Q8R429 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.42■□□□□ 0.54
Atp2a1Q8R429 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms