Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Zcchc9Q8R1J3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Zcchc9Q8R1J3 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.48■□□□□ 0.23
Zcchc9Q8R1J3 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Zcchc9Q8R1J3 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Zcchc9Q8R1J3 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Zcchc9Q8R1J3 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Zcchc9Q8R1J3 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Zcchc9Q8R1J3 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Zcchc9Q8R1J3 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Zcchc9Q8R1J3 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.48■□□□□ 0.23
Zcchc9Q8R1J3 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Zcchc9Q8R1J3 Gm11336-201ENSMUST00000118168 334 ntBASIC16.48■□□□□ 0.23
Zcchc9Q8R1J3 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Zcchc9Q8R1J3 Gm27000-201ENSMUST00000182943 842 ntBASIC16.48■□□□□ 0.23
Zcchc9Q8R1J3 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Zcchc9Q8R1J3 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.48■□□□□ 0.23
Zcchc9Q8R1J3 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Zcchc9Q8R1J3 Birc2-201ENSMUST00000054878 378 ntBASIC16.48■□□□□ 0.23
Zcchc9Q8R1J3 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Zcchc9Q8R1J3 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Zcchc9Q8R1J3 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Zcchc9Q8R1J3 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.48■□□□□ 0.23
Zcchc9Q8R1J3 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Zcchc9Q8R1J3 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.48■□□□□ 0.23
Zcchc9Q8R1J3 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Zcchc9Q8R1J3 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Zcchc9Q8R1J3 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Zcchc9Q8R1J3 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Zcchc9Q8R1J3 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Zcchc9Q8R1J3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zcchc9Q8R1J3 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zcchc9Q8R1J3 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zcchc9Q8R1J3 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zcchc9Q8R1J3 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zcchc9Q8R1J3 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.47■□□□□ 0.23
Zcchc9Q8R1J3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Zcchc9Q8R1J3 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.47■□□□□ 0.23
Zcchc9Q8R1J3 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.47■□□□□ 0.23
Zcchc9Q8R1J3 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.47■□□□□ 0.23
Zcchc9Q8R1J3 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zcchc9Q8R1J3 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.47■□□□□ 0.23
Zcchc9Q8R1J3 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Zcchc9Q8R1J3 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zcchc9Q8R1J3 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zcchc9Q8R1J3 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zcchc9Q8R1J3 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zcchc9Q8R1J3 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Zcchc9Q8R1J3 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.46■□□□□ 0.23
Zcchc9Q8R1J3 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zcchc9Q8R1J3 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zcchc9Q8R1J3 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zcchc9Q8R1J3 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Zcchc9Q8R1J3 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.46■□□□□ 0.23
Zcchc9Q8R1J3 Gm5864-201ENSMUST00000202263 970 ntBASIC16.46■□□□□ 0.23
Zcchc9Q8R1J3 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Zcchc9Q8R1J3 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Zcchc9Q8R1J3 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zcchc9Q8R1J3 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zcchc9Q8R1J3 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Zcchc9Q8R1J3 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zcchc9Q8R1J3 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zcchc9Q8R1J3 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zcchc9Q8R1J3 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zcchc9Q8R1J3 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.45■□□□□ 0.22
Zcchc9Q8R1J3 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Zcchc9Q8R1J3 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zcchc9Q8R1J3 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zcchc9Q8R1J3 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zcchc9Q8R1J3 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zcchc9Q8R1J3 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Zcchc9Q8R1J3 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zcchc9Q8R1J3 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zcchc9Q8R1J3 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.45■□□□□ 0.22
Zcchc9Q8R1J3 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Zcchc9Q8R1J3 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zcchc9Q8R1J3 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.45■□□□□ 0.22
Zcchc9Q8R1J3 Mir8098-201ENSMUST00000184011 137 ntBASIC16.45■□□□□ 0.22
Zcchc9Q8R1J3 Gm43347-201ENSMUST00000200226 580 ntBASIC16.45■□□□□ 0.22
Zcchc9Q8R1J3 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zcchc9Q8R1J3 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zcchc9Q8R1J3 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zcchc9Q8R1J3 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zcchc9Q8R1J3 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.45■□□□□ 0.22
Zcchc9Q8R1J3 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Zcchc9Q8R1J3 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Zcchc9Q8R1J3 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Zcchc9Q8R1J3 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Zcchc9Q8R1J3 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Zcchc9Q8R1J3 Gm12895-201ENSMUST00000122214 226 ntBASIC16.44■□□□□ 0.22
Zcchc9Q8R1J3 Gm27459-201ENSMUST00000184860 107 ntBASIC16.44■□□□□ 0.22
Zcchc9Q8R1J3 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Zcchc9Q8R1J3 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Zcchc9Q8R1J3 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Zcchc9Q8R1J3 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Zcchc9Q8R1J3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Zcchc9Q8R1J3 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Zcchc9Q8R1J3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Zcchc9Q8R1J3 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Zcchc9Q8R1J3 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms