Protein–RNA interactions for Protein: Q8R1J1

Tm6sf2, Transmembrane 6 superfamily member 2, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf2Q8R1J1 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tm6sf2Q8R1J1 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tm6sf2Q8R1J1 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.55■□□□□ 0.08
Tm6sf2Q8R1J1 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tm6sf2Q8R1J1 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tm6sf2Q8R1J1 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tm6sf2Q8R1J1 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tm6sf2Q8R1J1 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tm6sf2Q8R1J1 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tm6sf2Q8R1J1 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Tm6sf2Q8R1J1 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.55■□□□□ 0.08
Tm6sf2Q8R1J1 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Tm6sf2Q8R1J1 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Tm6sf2Q8R1J1 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.55■□□□□ 0.08
Tm6sf2Q8R1J1 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tm6sf2Q8R1J1 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tm6sf2Q8R1J1 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tm6sf2Q8R1J1 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tm6sf2Q8R1J1 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tm6sf2Q8R1J1 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tm6sf2Q8R1J1 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tm6sf2Q8R1J1 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tm6sf2Q8R1J1 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tm6sf2Q8R1J1 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tm6sf2Q8R1J1 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Tm6sf2Q8R1J1 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tm6sf2Q8R1J1 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.54■□□□□ 0.08
Tm6sf2Q8R1J1 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tm6sf2Q8R1J1 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Tm6sf2Q8R1J1 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tm6sf2Q8R1J1 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tm6sf2Q8R1J1 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tm6sf2Q8R1J1 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.54■□□□□ 0.08
Tm6sf2Q8R1J1 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tm6sf2Q8R1J1 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tm6sf2Q8R1J1 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Tm6sf2Q8R1J1 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Tm6sf2Q8R1J1 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tm6sf2Q8R1J1 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tm6sf2Q8R1J1 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.54■□□□□ 0.08
Tm6sf2Q8R1J1 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tm6sf2Q8R1J1 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tm6sf2Q8R1J1 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.53■□□□□ 0.08
Tm6sf2Q8R1J1 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tm6sf2Q8R1J1 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Tm6sf2Q8R1J1 Gm45328-201ENSMUST00000210942 917 ntBASIC15.53■□□□□ 0.08
Tm6sf2Q8R1J1 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tm6sf2Q8R1J1 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tm6sf2Q8R1J1 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tm6sf2Q8R1J1 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tm6sf2Q8R1J1 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tm6sf2Q8R1J1 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.53■□□□□ 0.08
Tm6sf2Q8R1J1 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tm6sf2Q8R1J1 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
Tm6sf2Q8R1J1 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.52■□□□□ 0.08
Tm6sf2Q8R1J1 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tm6sf2Q8R1J1 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tm6sf2Q8R1J1 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Tm6sf2Q8R1J1 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tm6sf2Q8R1J1 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.52■□□□□ 0.08
Tm6sf2Q8R1J1 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tm6sf2Q8R1J1 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tm6sf2Q8R1J1 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Tm6sf2Q8R1J1 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Tm6sf2Q8R1J1 Gm10819-201ENSMUST00000099988 561 ntBASIC15.52■□□□□ 0.08
Tm6sf2Q8R1J1 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Tm6sf2Q8R1J1 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Tm6sf2Q8R1J1 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tm6sf2Q8R1J1 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tm6sf2Q8R1J1 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tm6sf2Q8R1J1 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tm6sf2Q8R1J1 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tm6sf2Q8R1J1 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tm6sf2Q8R1J1 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tm6sf2Q8R1J1 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tm6sf2Q8R1J1 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tm6sf2Q8R1J1 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tm6sf2Q8R1J1 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tm6sf2Q8R1J1 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tm6sf2Q8R1J1 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tm6sf2Q8R1J1 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Tm6sf2Q8R1J1 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tm6sf2Q8R1J1 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tm6sf2Q8R1J1 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tm6sf2Q8R1J1 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.51■□□□□ 0.07
Tm6sf2Q8R1J1 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tm6sf2Q8R1J1 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.51■□□□□ 0.07
Tm6sf2Q8R1J1 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tm6sf2Q8R1J1 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tm6sf2Q8R1J1 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tm6sf2Q8R1J1 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tm6sf2Q8R1J1 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.51■□□□□ 0.07
Tm6sf2Q8R1J1 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Tm6sf2Q8R1J1 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tm6sf2Q8R1J1 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tm6sf2Q8R1J1 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tm6sf2Q8R1J1 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Tm6sf2Q8R1J1 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.5■□□□□ 0.07
Tm6sf2Q8R1J1 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Tm6sf2Q8R1J1 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms