Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sf3a1Q8K4Z5 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sf3a1Q8K4Z5 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Sf3a1Q8K4Z5 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Sf3a1Q8K4Z5 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sf3a1Q8K4Z5 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sf3a1Q8K4Z5 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sf3a1Q8K4Z5 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sf3a1Q8K4Z5 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sf3a1Q8K4Z5 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Sf3a1Q8K4Z5 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC20.24■□□□□ 0.83
Sf3a1Q8K4Z5 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC20.24■□□□□ 0.83
Sf3a1Q8K4Z5 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC20.24■□□□□ 0.83
Sf3a1Q8K4Z5 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sf3a1Q8K4Z5 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sf3a1Q8K4Z5 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sf3a1Q8K4Z5 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Sf3a1Q8K4Z5 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sf3a1Q8K4Z5 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sf3a1Q8K4Z5 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC20.24■□□□□ 0.83
Sf3a1Q8K4Z5 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Sf3a1Q8K4Z5 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sf3a1Q8K4Z5 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sf3a1Q8K4Z5 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sf3a1Q8K4Z5 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC20.24■□□□□ 0.83
Sf3a1Q8K4Z5 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Sf3a1Q8K4Z5 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Sf3a1Q8K4Z5 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC20.23■□□□□ 0.83
Sf3a1Q8K4Z5 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Sf3a1Q8K4Z5 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sf3a1Q8K4Z5 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sf3a1Q8K4Z5 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sf3a1Q8K4Z5 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sf3a1Q8K4Z5 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sf3a1Q8K4Z5 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sf3a1Q8K4Z5 Gm29707-201ENSMUST00000196325 491 ntBASIC20.23■□□□□ 0.83
Sf3a1Q8K4Z5 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sf3a1Q8K4Z5 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC20.23■□□□□ 0.83
Sf3a1Q8K4Z5 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sf3a1Q8K4Z5 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sf3a1Q8K4Z5 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sf3a1Q8K4Z5 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sf3a1Q8K4Z5 AC154231.1-201ENSMUST00000220564 2175 ntBASIC20.22■□□□□ 0.83
Sf3a1Q8K4Z5 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC20.22■□□□□ 0.83
Sf3a1Q8K4Z5 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sf3a1Q8K4Z5 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sf3a1Q8K4Z5 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sf3a1Q8K4Z5 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Sf3a1Q8K4Z5 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sf3a1Q8K4Z5 Gm25016-201ENSMUST00000158399 131 ntBASIC20.22■□□□□ 0.83
Sf3a1Q8K4Z5 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Sf3a1Q8K4Z5 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Sf3a1Q8K4Z5 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Sf3a1Q8K4Z5 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sf3a1Q8K4Z5 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sf3a1Q8K4Z5 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sf3a1Q8K4Z5 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sf3a1Q8K4Z5 Gm36858-201ENSMUST00000194501 2391 ntBASIC20.21■□□□□ 0.83
Sf3a1Q8K4Z5 Gm8839-201ENSMUST00000121279 1645 ntBASIC20.21■□□□□ 0.83
Sf3a1Q8K4Z5 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC20.21■□□□□ 0.83
Sf3a1Q8K4Z5 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sf3a1Q8K4Z5 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Sf3a1Q8K4Z5 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sf3a1Q8K4Z5 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC20.21■□□□□ 0.83
Sf3a1Q8K4Z5 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Sf3a1Q8K4Z5 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
Sf3a1Q8K4Z5 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sf3a1Q8K4Z5 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sf3a1Q8K4Z5 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sf3a1Q8K4Z5 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sf3a1Q8K4Z5 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC20.21■□□□□ 0.83
Sf3a1Q8K4Z5 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC20.21■□□□□ 0.83
Sf3a1Q8K4Z5 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sf3a1Q8K4Z5 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Sf3a1Q8K4Z5 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sf3a1Q8K4Z5 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sf3a1Q8K4Z5 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sf3a1Q8K4Z5 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sf3a1Q8K4Z5 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sf3a1Q8K4Z5 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sf3a1Q8K4Z5 Mir770-201ENSMUST00000103252 94 ntBASIC20.2■□□□□ 0.82
Sf3a1Q8K4Z5 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Sf3a1Q8K4Z5 Gm6345-202ENSMUST00000180900 204 ntBASIC20.2■□□□□ 0.82
Sf3a1Q8K4Z5 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sf3a1Q8K4Z5 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC20.2■□□□□ 0.82
Sf3a1Q8K4Z5 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sf3a1Q8K4Z5 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sf3a1Q8K4Z5 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC20.2■□□□□ 0.82
Sf3a1Q8K4Z5 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sf3a1Q8K4Z5 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sf3a1Q8K4Z5 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC20.2■□□□□ 0.82
Sf3a1Q8K4Z5 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sf3a1Q8K4Z5 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sf3a1Q8K4Z5 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sf3a1Q8K4Z5 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Sf3a1Q8K4Z5 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sf3a1Q8K4Z5 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Sf3a1Q8K4Z5 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sf3a1Q8K4Z5 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sf3a1Q8K4Z5 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms