Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cchcr1Q8K2I2 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cchcr1Q8K2I2 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cchcr1Q8K2I2 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cchcr1Q8K2I2 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cchcr1Q8K2I2 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cchcr1Q8K2I2 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cchcr1Q8K2I2 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cchcr1Q8K2I2 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cchcr1Q8K2I2 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cchcr1Q8K2I2 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Cchcr1Q8K2I2 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cchcr1Q8K2I2 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.56■□□□□ 0.72
Cchcr1Q8K2I2 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cchcr1Q8K2I2 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.56■□□□□ 0.72
Cchcr1Q8K2I2 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.56■□□□□ 0.72
Cchcr1Q8K2I2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
Cchcr1Q8K2I2 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.56■□□□□ 0.72
Cchcr1Q8K2I2 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cchcr1Q8K2I2 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cchcr1Q8K2I2 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cchcr1Q8K2I2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cchcr1Q8K2I2 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cchcr1Q8K2I2 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cchcr1Q8K2I2 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cchcr1Q8K2I2 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.55■□□□□ 0.72
Cchcr1Q8K2I2 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cchcr1Q8K2I2 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.55■□□□□ 0.72
Cchcr1Q8K2I2 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cchcr1Q8K2I2 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cchcr1Q8K2I2 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cchcr1Q8K2I2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.55■□□□□ 0.72
Cchcr1Q8K2I2 Gm27011-201ENSMUST00000182352 972 ntBASIC19.55■□□□□ 0.72
Cchcr1Q8K2I2 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.55■□□□□ 0.72
Cchcr1Q8K2I2 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.55■□□□□ 0.72
Cchcr1Q8K2I2 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cchcr1Q8K2I2 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cchcr1Q8K2I2 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cchcr1Q8K2I2 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Cchcr1Q8K2I2 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cchcr1Q8K2I2 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cchcr1Q8K2I2 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cchcr1Q8K2I2 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Cchcr1Q8K2I2 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Cchcr1Q8K2I2 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cchcr1Q8K2I2 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Cchcr1Q8K2I2 Gm11539-201ENSMUST00000119837 557 ntBASIC19.54■□□□□ 0.72
Cchcr1Q8K2I2 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.54■□□□□ 0.72
Cchcr1Q8K2I2 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.54■□□□□ 0.72
Cchcr1Q8K2I2 Gm18115-201ENSMUST00000221209 621 ntBASIC19.54■□□□□ 0.72
Cchcr1Q8K2I2 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cchcr1Q8K2I2 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cchcr1Q8K2I2 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cchcr1Q8K2I2 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cchcr1Q8K2I2 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.54■□□□□ 0.72
Cchcr1Q8K2I2 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cchcr1Q8K2I2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cchcr1Q8K2I2 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cchcr1Q8K2I2 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cchcr1Q8K2I2 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.53■□□□□ 0.72
Cchcr1Q8K2I2 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cchcr1Q8K2I2 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Cchcr1Q8K2I2 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cchcr1Q8K2I2 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cchcr1Q8K2I2 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cchcr1Q8K2I2 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cchcr1Q8K2I2 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cchcr1Q8K2I2 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
Cchcr1Q8K2I2 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.53■□□□□ 0.72
Cchcr1Q8K2I2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.53■□□□□ 0.72
Cchcr1Q8K2I2 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cchcr1Q8K2I2 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cchcr1Q8K2I2 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cchcr1Q8K2I2 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cchcr1Q8K2I2 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cchcr1Q8K2I2 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cchcr1Q8K2I2 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cchcr1Q8K2I2 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.53■□□□□ 0.72
Cchcr1Q8K2I2 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cchcr1Q8K2I2 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cchcr1Q8K2I2 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cchcr1Q8K2I2 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cchcr1Q8K2I2 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cchcr1Q8K2I2 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cchcr1Q8K2I2 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Cchcr1Q8K2I2 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cchcr1Q8K2I2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cchcr1Q8K2I2 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cchcr1Q8K2I2 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cchcr1Q8K2I2 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cchcr1Q8K2I2 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
Cchcr1Q8K2I2 Gm13474-201ENSMUST00000122466 815 ntBASIC19.52■□□□□ 0.72
Cchcr1Q8K2I2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cchcr1Q8K2I2 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC19.52■□□□□ 0.72
Cchcr1Q8K2I2 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cchcr1Q8K2I2 Gm5417-201ENSMUST00000079706 384 ntBASIC19.52■□□□□ 0.72
Cchcr1Q8K2I2 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cchcr1Q8K2I2 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cchcr1Q8K2I2 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cchcr1Q8K2I2 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms