Protein–RNA interactions for Protein: Q8K212

Pacs1, Phosphofurin acidic cluster sorting protein 1, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pacs1Q8K212 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pacs1Q8K212 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pacs1Q8K212 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
Pacs1Q8K212 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pacs1Q8K212 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pacs1Q8K212 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.72■□□□□ 0.27
Pacs1Q8K212 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pacs1Q8K212 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
Pacs1Q8K212 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.72■□□□□ 0.27
Pacs1Q8K212 Gm11539-201ENSMUST00000119837 557 ntBASIC16.72■□□□□ 0.27
Pacs1Q8K212 Gm13436-201ENSMUST00000120418 567 ntBASIC16.72■□□□□ 0.27
Pacs1Q8K212 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.72■□□□□ 0.27
Pacs1Q8K212 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pacs1Q8K212 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pacs1Q8K212 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pacs1Q8K212 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pacs1Q8K212 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pacs1Q8K212 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pacs1Q8K212 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pacs1Q8K212 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pacs1Q8K212 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pacs1Q8K212 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pacs1Q8K212 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pacs1Q8K212 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pacs1Q8K212 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.71■□□□□ 0.27
Pacs1Q8K212 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pacs1Q8K212 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Pacs1Q8K212 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pacs1Q8K212 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Pacs1Q8K212 Gm13559-201ENSMUST00000120476 863 ntBASIC16.71■□□□□ 0.27
Pacs1Q8K212 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.71■□□□□ 0.27
Pacs1Q8K212 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pacs1Q8K212 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Pacs1Q8K212 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Pacs1Q8K212 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pacs1Q8K212 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pacs1Q8K212 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Pacs1Q8K212 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.71■□□□□ 0.27
Pacs1Q8K212 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pacs1Q8K212 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.71■□□□□ 0.27
Pacs1Q8K212 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pacs1Q8K212 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pacs1Q8K212 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.71■□□□□ 0.26
Pacs1Q8K212 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Pacs1Q8K212 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pacs1Q8K212 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pacs1Q8K212 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pacs1Q8K212 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pacs1Q8K212 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pacs1Q8K212 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Pacs1Q8K212 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Pacs1Q8K212 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pacs1Q8K212 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pacs1Q8K212 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pacs1Q8K212 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pacs1Q8K212 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pacs1Q8K212 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pacs1Q8K212 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pacs1Q8K212 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Pacs1Q8K212 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pacs1Q8K212 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Pacs1Q8K212 Gm18958-201ENSMUST00000174258 762 ntBASIC16.7■□□□□ 0.26
Pacs1Q8K212 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.7■□□□□ 0.26
Pacs1Q8K212 Mir6982-201ENSMUST00000184354 68 ntBASIC16.7■□□□□ 0.26
Pacs1Q8K212 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pacs1Q8K212 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pacs1Q8K212 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pacs1Q8K212 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pacs1Q8K212 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pacs1Q8K212 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pacs1Q8K212 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pacs1Q8K212 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.7■□□□□ 0.26
Pacs1Q8K212 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pacs1Q8K212 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pacs1Q8K212 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pacs1Q8K212 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pacs1Q8K212 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pacs1Q8K212 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pacs1Q8K212 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pacs1Q8K212 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Pacs1Q8K212 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pacs1Q8K212 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pacs1Q8K212 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pacs1Q8K212 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pacs1Q8K212 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.69■□□□□ 0.26
Pacs1Q8K212 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pacs1Q8K212 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pacs1Q8K212 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.69■□□□□ 0.26
Pacs1Q8K212 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pacs1Q8K212 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pacs1Q8K212 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pacs1Q8K212 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pacs1Q8K212 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pacs1Q8K212 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pacs1Q8K212 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pacs1Q8K212 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pacs1Q8K212 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pacs1Q8K212 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Pacs1Q8K212 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pacs1Q8K212 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms