Protein–RNA interactions for Protein: Q8K1X4

Nckap1l, Nck-associated protein 1-like, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1lQ8K1X4 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nckap1lQ8K1X4 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nckap1lQ8K1X4 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nckap1lQ8K1X4 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nckap1lQ8K1X4 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nckap1lQ8K1X4 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.09■□□□□ 0.17
Nckap1lQ8K1X4 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nckap1lQ8K1X4 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nckap1lQ8K1X4 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nckap1lQ8K1X4 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nckap1lQ8K1X4 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nckap1lQ8K1X4 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nckap1lQ8K1X4 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nckap1lQ8K1X4 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Nckap1lQ8K1X4 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Nckap1lQ8K1X4 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nckap1lQ8K1X4 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Nckap1lQ8K1X4 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nckap1lQ8K1X4 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nckap1lQ8K1X4 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nckap1lQ8K1X4 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.09■□□□□ 0.17
Nckap1lQ8K1X4 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nckap1lQ8K1X4 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nckap1lQ8K1X4 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nckap1lQ8K1X4 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nckap1lQ8K1X4 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Nckap1lQ8K1X4 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Nckap1lQ8K1X4 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nckap1lQ8K1X4 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nckap1lQ8K1X4 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nckap1lQ8K1X4 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Nckap1lQ8K1X4 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Nckap1lQ8K1X4 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nckap1lQ8K1X4 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nckap1lQ8K1X4 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nckap1lQ8K1X4 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nckap1lQ8K1X4 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.08■□□□□ 0.16
Nckap1lQ8K1X4 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nckap1lQ8K1X4 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nckap1lQ8K1X4 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nckap1lQ8K1X4 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nckap1lQ8K1X4 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nckap1lQ8K1X4 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nckap1lQ8K1X4 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nckap1lQ8K1X4 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Nckap1lQ8K1X4 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nckap1lQ8K1X4 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nckap1lQ8K1X4 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nckap1lQ8K1X4 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.08■□□□□ 0.16
Nckap1lQ8K1X4 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.07■□□□□ 0.16
Nckap1lQ8K1X4 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nckap1lQ8K1X4 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nckap1lQ8K1X4 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nckap1lQ8K1X4 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Nckap1lQ8K1X4 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nckap1lQ8K1X4 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.07■□□□□ 0.16
Nckap1lQ8K1X4 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Nckap1lQ8K1X4 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Nckap1lQ8K1X4 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Nckap1lQ8K1X4 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nckap1lQ8K1X4 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.07■□□□□ 0.16
Nckap1lQ8K1X4 Gm5417-201ENSMUST00000079706 384 ntBASIC16.07■□□□□ 0.16
Nckap1lQ8K1X4 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nckap1lQ8K1X4 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.07■□□□□ 0.16
Nckap1lQ8K1X4 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nckap1lQ8K1X4 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nckap1lQ8K1X4 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.07■□□□□ 0.16
Nckap1lQ8K1X4 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nckap1lQ8K1X4 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nckap1lQ8K1X4 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nckap1lQ8K1X4 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nckap1lQ8K1X4 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nckap1lQ8K1X4 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nckap1lQ8K1X4 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nckap1lQ8K1X4 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Nckap1lQ8K1X4 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nckap1lQ8K1X4 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nckap1lQ8K1X4 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nckap1lQ8K1X4 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nckap1lQ8K1X4 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nckap1lQ8K1X4 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nckap1lQ8K1X4 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nckap1lQ8K1X4 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nckap1lQ8K1X4 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nckap1lQ8K1X4 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nckap1lQ8K1X4 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nckap1lQ8K1X4 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.06■□□□□ 0.16
Nckap1lQ8K1X4 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nckap1lQ8K1X4 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.06■□□□□ 0.16
Nckap1lQ8K1X4 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nckap1lQ8K1X4 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nckap1lQ8K1X4 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.06■□□□□ 0.16
Nckap1lQ8K1X4 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.06■□□□□ 0.16
Nckap1lQ8K1X4 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.06■□□□□ 0.16
Nckap1lQ8K1X4 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nckap1lQ8K1X4 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nckap1lQ8K1X4 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nckap1lQ8K1X4 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nckap1lQ8K1X4 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nckap1lQ8K1X4 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms