Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgcll1Q8JZS7 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgcll1Q8JZS7 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Hmgcll1Q8JZS7 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17■□□□□ 0.31
Hmgcll1Q8JZS7 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17■□□□□ 0.31
Hmgcll1Q8JZS7 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17■□□□□ 0.31
Hmgcll1Q8JZS7 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgcll1Q8JZS7 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgcll1Q8JZS7 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgcll1Q8JZS7 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgcll1Q8JZS7 Gm15372-201ENSMUST00000120729 834 ntBASIC17■□□□□ 0.31
Hmgcll1Q8JZS7 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17■□□□□ 0.31
Hmgcll1Q8JZS7 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17■□□□□ 0.31
Hmgcll1Q8JZS7 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17■□□□□ 0.31
Hmgcll1Q8JZS7 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgcll1Q8JZS7 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgcll1Q8JZS7 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Hmgcll1Q8JZS7 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17■□□□□ 0.31
Hmgcll1Q8JZS7 Birc2-201ENSMUST00000054878 378 ntBASIC17■□□□□ 0.31
Hmgcll1Q8JZS7 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgcll1Q8JZS7 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgcll1Q8JZS7 Gm19439-201ENSMUST00000198195 2273 ntBASIC17■□□□□ 0.31
Hmgcll1Q8JZS7 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgcll1Q8JZS7 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17■□□□□ 0.31
Hmgcll1Q8JZS7 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
Hmgcll1Q8JZS7 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Hmgcll1Q8JZS7 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17■□□□□ 0.31
Hmgcll1Q8JZS7 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Hmgcll1Q8JZS7 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17■□□□□ 0.31
Hmgcll1Q8JZS7 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgcll1Q8JZS7 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgcll1Q8JZS7 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgcll1Q8JZS7 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgcll1Q8JZS7 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgcll1Q8JZS7 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgcll1Q8JZS7 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.99■□□□□ 0.31
Hmgcll1Q8JZS7 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgcll1Q8JZS7 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgcll1Q8JZS7 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgcll1Q8JZS7 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
Hmgcll1Q8JZS7 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
Hmgcll1Q8JZS7 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Hmgcll1Q8JZS7 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgcll1Q8JZS7 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgcll1Q8JZS7 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgcll1Q8JZS7 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.99■□□□□ 0.31
Hmgcll1Q8JZS7 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgcll1Q8JZS7 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Hmgcll1Q8JZS7 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgcll1Q8JZS7 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Hmgcll1Q8JZS7 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgcll1Q8JZS7 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.98■□□□□ 0.31
Hmgcll1Q8JZS7 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgcll1Q8JZS7 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgcll1Q8JZS7 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Hmgcll1Q8JZS7 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgcll1Q8JZS7 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgcll1Q8JZS7 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgcll1Q8JZS7 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgcll1Q8JZS7 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
Hmgcll1Q8JZS7 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.98■□□□□ 0.31
Hmgcll1Q8JZS7 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Hmgcll1Q8JZS7 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Hmgcll1Q8JZS7 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgcll1Q8JZS7 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgcll1Q8JZS7 Gm24589-201ENSMUST00000116692 94 ntBASIC16.98■□□□□ 0.31
Hmgcll1Q8JZS7 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgcll1Q8JZS7 Rprl3-201ENSMUST00000157400 290 ntBASIC16.98■□□□□ 0.31
Hmgcll1Q8JZS7 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgcll1Q8JZS7 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgcll1Q8JZS7 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgcll1Q8JZS7 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgcll1Q8JZS7 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgcll1Q8JZS7 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgcll1Q8JZS7 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgcll1Q8JZS7 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Hmgcll1Q8JZS7 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Hmgcll1Q8JZS7 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hmgcll1Q8JZS7 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hmgcll1Q8JZS7 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hmgcll1Q8JZS7 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hmgcll1Q8JZS7 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.97■□□□□ 0.31
Hmgcll1Q8JZS7 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.97■□□□□ 0.31
Hmgcll1Q8JZS7 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hmgcll1Q8JZS7 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Hmgcll1Q8JZS7 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Hmgcll1Q8JZS7 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.97■□□□□ 0.31
Hmgcll1Q8JZS7 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.97■□□□□ 0.31
Hmgcll1Q8JZS7 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hmgcll1Q8JZS7 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.97■□□□□ 0.31
Hmgcll1Q8JZS7 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.97■□□□□ 0.31
Hmgcll1Q8JZS7 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
Hmgcll1Q8JZS7 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
Hmgcll1Q8JZS7 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
Hmgcll1Q8JZS7 Gm36967-201ENSMUST00000193814 266 ntBASIC16.97■□□□□ 0.31
Hmgcll1Q8JZS7 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hmgcll1Q8JZS7 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hmgcll1Q8JZS7 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Hmgcll1Q8JZS7 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hmgcll1Q8JZS7 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms