Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rfwd3Q8CIK8 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rfwd3Q8CIK8 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.58■□□□□ 0.09
Rfwd3Q8CIK8 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rfwd3Q8CIK8 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rfwd3Q8CIK8 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.58■□□□□ 0.08
Rfwd3Q8CIK8 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rfwd3Q8CIK8 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rfwd3Q8CIK8 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rfwd3Q8CIK8 Gm22697-201ENSMUST00000175194 63 ntBASIC15.58■□□□□ 0.08
Rfwd3Q8CIK8 Gm18101-201ENSMUST00000215769 548 ntBASIC15.58■□□□□ 0.08
Rfwd3Q8CIK8 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Rfwd3Q8CIK8 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rfwd3Q8CIK8 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rfwd3Q8CIK8 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.58■□□□□ 0.08
Rfwd3Q8CIK8 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rfwd3Q8CIK8 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rfwd3Q8CIK8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rfwd3Q8CIK8 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rfwd3Q8CIK8 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rfwd3Q8CIK8 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Rfwd3Q8CIK8 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Rfwd3Q8CIK8 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rfwd3Q8CIK8 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfwd3Q8CIK8 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.57■□□□□ 0.08
Rfwd3Q8CIK8 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.57■□□□□ 0.08
Rfwd3Q8CIK8 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfwd3Q8CIK8 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfwd3Q8CIK8 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfwd3Q8CIK8 Gm10013-201ENSMUST00000106074 672 ntBASIC15.57■□□□□ 0.08
Rfwd3Q8CIK8 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rfwd3Q8CIK8 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Rfwd3Q8CIK8 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfwd3Q8CIK8 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rfwd3Q8CIK8 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfwd3Q8CIK8 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfwd3Q8CIK8 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfwd3Q8CIK8 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.57■□□□□ 0.08
Rfwd3Q8CIK8 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.57■□□□□ 0.08
Rfwd3Q8CIK8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Rfwd3Q8CIK8 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfwd3Q8CIK8 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfwd3Q8CIK8 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfwd3Q8CIK8 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfwd3Q8CIK8 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.56■□□□□ 0.08
Rfwd3Q8CIK8 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rfwd3Q8CIK8 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfwd3Q8CIK8 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfwd3Q8CIK8 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfwd3Q8CIK8 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfwd3Q8CIK8 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.56■□□□□ 0.08
Rfwd3Q8CIK8 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Rfwd3Q8CIK8 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfwd3Q8CIK8 Gm10566-201ENSMUST00000086739 996 ntBASIC15.56■□□□□ 0.08
Rfwd3Q8CIK8 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Rfwd3Q8CIK8 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rfwd3Q8CIK8 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfwd3Q8CIK8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfwd3Q8CIK8 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rfwd3Q8CIK8 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfwd3Q8CIK8 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Rfwd3Q8CIK8 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfwd3Q8CIK8 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.55■□□□□ 0.08
Rfwd3Q8CIK8 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfwd3Q8CIK8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfwd3Q8CIK8 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.55■□□□□ 0.08
Rfwd3Q8CIK8 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfwd3Q8CIK8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfwd3Q8CIK8 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Rfwd3Q8CIK8 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rfwd3Q8CIK8 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfwd3Q8CIK8 Gm27389-201ENSMUST00000183622 195 ntBASIC15.55■□□□□ 0.08
Rfwd3Q8CIK8 Gm21559-201ENSMUST00000220638 855 ntBASIC15.55■□□□□ 0.08
Rfwd3Q8CIK8 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.55■□□□□ 0.08
Rfwd3Q8CIK8 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfwd3Q8CIK8 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfwd3Q8CIK8 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfwd3Q8CIK8 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.55■□□□□ 0.08
Rfwd3Q8CIK8 Gm8587-201ENSMUST00000076538 843 ntBASIC15.55■□□□□ 0.08
Rfwd3Q8CIK8 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Rfwd3Q8CIK8 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Rfwd3Q8CIK8 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfwd3Q8CIK8 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfwd3Q8CIK8 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfwd3Q8CIK8 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfwd3Q8CIK8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfwd3Q8CIK8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Rfwd3Q8CIK8 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfwd3Q8CIK8 Gm13186-201ENSMUST00000118031 316 ntBASIC15.54■□□□□ 0.08
Rfwd3Q8CIK8 Gm26039-201ENSMUST00000158152 144 ntBASIC15.54■□□□□ 0.08
Rfwd3Q8CIK8 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfwd3Q8CIK8 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.54■□□□□ 0.08
Rfwd3Q8CIK8 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.54■□□□□ 0.08
Rfwd3Q8CIK8 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Rfwd3Q8CIK8 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfwd3Q8CIK8 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfwd3Q8CIK8 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfwd3Q8CIK8 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfwd3Q8CIK8 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfwd3Q8CIK8 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms