Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Depdc1aQ8CIG0 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Depdc1aQ8CIG0 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Depdc1aQ8CIG0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Depdc1aQ8CIG0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Depdc1aQ8CIG0 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Depdc1aQ8CIG0 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Depdc1aQ8CIG0 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Depdc1aQ8CIG0 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Depdc1aQ8CIG0 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Depdc1aQ8CIG0 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Depdc1aQ8CIG0 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Depdc1aQ8CIG0 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Depdc1aQ8CIG0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Depdc1aQ8CIG0 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Depdc1aQ8CIG0 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Depdc1aQ8CIG0 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Depdc1aQ8CIG0 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Depdc1aQ8CIG0 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Depdc1aQ8CIG0 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Depdc1aQ8CIG0 Gm27867-201ENSMUST00000184778 125 ntBASIC18.59■□□□□ 0.57
Depdc1aQ8CIG0 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.59■□□□□ 0.57
Depdc1aQ8CIG0 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Depdc1aQ8CIG0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Depdc1aQ8CIG0 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Depdc1aQ8CIG0 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Depdc1aQ8CIG0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Depdc1aQ8CIG0 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Depdc1aQ8CIG0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Depdc1aQ8CIG0 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Depdc1aQ8CIG0 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.58■□□□□ 0.56
Depdc1aQ8CIG0 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.58■□□□□ 0.56
Depdc1aQ8CIG0 Gm15165-201ENSMUST00000118140 502 ntBASIC18.58■□□□□ 0.56
Depdc1aQ8CIG0 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.58■□□□□ 0.56
Depdc1aQ8CIG0 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.58■□□□□ 0.56
Depdc1aQ8CIG0 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.58■□□□□ 0.56
Depdc1aQ8CIG0 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.58■□□□□ 0.56
Depdc1aQ8CIG0 Gm43347-201ENSMUST00000200226 580 ntBASIC18.58■□□□□ 0.56
Depdc1aQ8CIG0 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.58■□□□□ 0.56
Depdc1aQ8CIG0 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Depdc1aQ8CIG0 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Depdc1aQ8CIG0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.58■□□□□ 0.56
Depdc1aQ8CIG0 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Depdc1aQ8CIG0 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Depdc1aQ8CIG0 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Depdc1aQ8CIG0 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Depdc1aQ8CIG0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Depdc1aQ8CIG0 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Depdc1aQ8CIG0 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.57■□□□□ 0.56
Depdc1aQ8CIG0 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Depdc1aQ8CIG0 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Depdc1aQ8CIG0 Gm12644-201ENSMUST00000119935 606 ntBASIC18.57■□□□□ 0.56
Depdc1aQ8CIG0 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Depdc1aQ8CIG0 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Depdc1aQ8CIG0 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.57■□□□□ 0.56
Depdc1aQ8CIG0 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Depdc1aQ8CIG0 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Depdc1aQ8CIG0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Depdc1aQ8CIG0 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Depdc1aQ8CIG0 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Depdc1aQ8CIG0 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Depdc1aQ8CIG0 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.57■□□□□ 0.56
Depdc1aQ8CIG0 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Depdc1aQ8CIG0 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Depdc1aQ8CIG0 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Depdc1aQ8CIG0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Depdc1aQ8CIG0 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Depdc1aQ8CIG0 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Depdc1aQ8CIG0 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Depdc1aQ8CIG0 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Depdc1aQ8CIG0 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Depdc1aQ8CIG0 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Depdc1aQ8CIG0 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Depdc1aQ8CIG0 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Depdc1aQ8CIG0 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Depdc1aQ8CIG0 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Depdc1aQ8CIG0 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Depdc1aQ8CIG0 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.56■□□□□ 0.56
Depdc1aQ8CIG0 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.56■□□□□ 0.56
Depdc1aQ8CIG0 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.56■□□□□ 0.56
Depdc1aQ8CIG0 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Depdc1aQ8CIG0 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Depdc1aQ8CIG0 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Depdc1aQ8CIG0 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Depdc1aQ8CIG0 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Depdc1aQ8CIG0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Depdc1aQ8CIG0 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Depdc1aQ8CIG0 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Depdc1aQ8CIG0 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Depdc1aQ8CIG0 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Depdc1aQ8CIG0 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Depdc1aQ8CIG0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Depdc1aQ8CIG0 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Depdc1aQ8CIG0 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Depdc1aQ8CIG0 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Depdc1aQ8CIG0 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.55■□□□□ 0.56
Depdc1aQ8CIG0 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Depdc1aQ8CIG0 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.55■□□□□ 0.56
Depdc1aQ8CIG0 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.55■□□□□ 0.56
Depdc1aQ8CIG0 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms