Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Zc3h3Q8CHP0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zc3h3Q8CHP0 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zc3h3Q8CHP0 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zc3h3Q8CHP0 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Zc3h3Q8CHP0 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zc3h3Q8CHP0 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.14■□□□□ 0.18
Zc3h3Q8CHP0 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3h3Q8CHP0 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3h3Q8CHP0 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3h3Q8CHP0 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Zc3h3Q8CHP0 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3h3Q8CHP0 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.14■□□□□ 0.17
Zc3h3Q8CHP0 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3h3Q8CHP0 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3h3Q8CHP0 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Zc3h3Q8CHP0 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.14■□□□□ 0.17
Zc3h3Q8CHP0 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.14■□□□□ 0.17
Zc3h3Q8CHP0 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.14■□□□□ 0.17
Zc3h3Q8CHP0 Gm9172-201ENSMUST00000212092 954 ntBASIC16.14■□□□□ 0.17
Zc3h3Q8CHP0 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3h3Q8CHP0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3h3Q8CHP0 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3h3Q8CHP0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3h3Q8CHP0 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.14■□□□□ 0.17
Zc3h3Q8CHP0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3h3Q8CHP0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3h3Q8CHP0 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3h3Q8CHP0 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Zc3h3Q8CHP0 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3h3Q8CHP0 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Zc3h3Q8CHP0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3h3Q8CHP0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Zc3h3Q8CHP0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3h3Q8CHP0 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.13■□□□□ 0.17
Zc3h3Q8CHP0 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
Zc3h3Q8CHP0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3h3Q8CHP0 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3h3Q8CHP0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Zc3h3Q8CHP0 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3h3Q8CHP0 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3h3Q8CHP0 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Zc3h3Q8CHP0 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3h3Q8CHP0 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3h3Q8CHP0 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3h3Q8CHP0 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.13■□□□□ 0.17
Zc3h3Q8CHP0 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.13■□□□□ 0.17
Zc3h3Q8CHP0 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3h3Q8CHP0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3h3Q8CHP0 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3h3Q8CHP0 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3h3Q8CHP0 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Zc3h3Q8CHP0 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3h3Q8CHP0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3h3Q8CHP0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3h3Q8CHP0 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Zc3h3Q8CHP0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3h3Q8CHP0 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3h3Q8CHP0 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3h3Q8CHP0 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3h3Q8CHP0 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3h3Q8CHP0 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3h3Q8CHP0 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3h3Q8CHP0 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3h3Q8CHP0 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.12■□□□□ 0.17
Zc3h3Q8CHP0 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.12■□□□□ 0.17
Zc3h3Q8CHP0 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3h3Q8CHP0 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Zc3h3Q8CHP0 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.12■□□□□ 0.17
Zc3h3Q8CHP0 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.12■□□□□ 0.17
Zc3h3Q8CHP0 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3h3Q8CHP0 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3h3Q8CHP0 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3h3Q8CHP0 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3h3Q8CHP0 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Zc3h3Q8CHP0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3h3Q8CHP0 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3h3Q8CHP0 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3h3Q8CHP0 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.12■□□□□ 0.17
Zc3h3Q8CHP0 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3h3Q8CHP0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Zc3h3Q8CHP0 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Zc3h3Q8CHP0 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.11■□□□□ 0.17
Zc3h3Q8CHP0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Zc3h3Q8CHP0 Gm11764-201ENSMUST00000120221 623 ntBASIC16.11■□□□□ 0.17
Zc3h3Q8CHP0 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zc3h3Q8CHP0 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Zc3h3Q8CHP0 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.11■□□□□ 0.17
Zc3h3Q8CHP0 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC16.11■□□□□ 0.17
Zc3h3Q8CHP0 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zc3h3Q8CHP0 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Zc3h3Q8CHP0 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zc3h3Q8CHP0 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zc3h3Q8CHP0 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zc3h3Q8CHP0 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zc3h3Q8CHP0 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.11■□□□□ 0.17
Zc3h3Q8CHP0 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zc3h3Q8CHP0 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zc3h3Q8CHP0 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zc3h3Q8CHP0 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms