Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vcpip1Q8CDG3 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vcpip1Q8CDG3 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vcpip1Q8CDG3 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vcpip1Q8CDG3 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vcpip1Q8CDG3 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vcpip1Q8CDG3 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Vcpip1Q8CDG3 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vcpip1Q8CDG3 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vcpip1Q8CDG3 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vcpip1Q8CDG3 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vcpip1Q8CDG3 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vcpip1Q8CDG3 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vcpip1Q8CDG3 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vcpip1Q8CDG3 Mir5122-201ENSMUST00000175004 89 ntBASIC17.79■□□□□ 0.44
Vcpip1Q8CDG3 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vcpip1Q8CDG3 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vcpip1Q8CDG3 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.79■□□□□ 0.44
Vcpip1Q8CDG3 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.79■□□□□ 0.44
Vcpip1Q8CDG3 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vcpip1Q8CDG3 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vcpip1Q8CDG3 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vcpip1Q8CDG3 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vcpip1Q8CDG3 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vcpip1Q8CDG3 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vcpip1Q8CDG3 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vcpip1Q8CDG3 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vcpip1Q8CDG3 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Vcpip1Q8CDG3 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Vcpip1Q8CDG3 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Vcpip1Q8CDG3 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vcpip1Q8CDG3 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Vcpip1Q8CDG3 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Vcpip1Q8CDG3 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vcpip1Q8CDG3 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Vcpip1Q8CDG3 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vcpip1Q8CDG3 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vcpip1Q8CDG3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.78■□□□□ 0.44
Vcpip1Q8CDG3 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vcpip1Q8CDG3 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Vcpip1Q8CDG3 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Vcpip1Q8CDG3 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Vcpip1Q8CDG3 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vcpip1Q8CDG3 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vcpip1Q8CDG3 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vcpip1Q8CDG3 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Vcpip1Q8CDG3 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vcpip1Q8CDG3 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vcpip1Q8CDG3 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Vcpip1Q8CDG3 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vcpip1Q8CDG3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Vcpip1Q8CDG3 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Vcpip1Q8CDG3 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.77■□□□□ 0.44
Vcpip1Q8CDG3 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vcpip1Q8CDG3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vcpip1Q8CDG3 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Vcpip1Q8CDG3 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vcpip1Q8CDG3 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vcpip1Q8CDG3 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vcpip1Q8CDG3 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Vcpip1Q8CDG3 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vcpip1Q8CDG3 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Vcpip1Q8CDG3 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vcpip1Q8CDG3 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vcpip1Q8CDG3 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vcpip1Q8CDG3 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Vcpip1Q8CDG3 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vcpip1Q8CDG3 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vcpip1Q8CDG3 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.76■□□□□ 0.43
Vcpip1Q8CDG3 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vcpip1Q8CDG3 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vcpip1Q8CDG3 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Vcpip1Q8CDG3 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vcpip1Q8CDG3 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.76■□□□□ 0.43
Vcpip1Q8CDG3 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vcpip1Q8CDG3 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vcpip1Q8CDG3 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.76■□□□□ 0.43
Vcpip1Q8CDG3 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vcpip1Q8CDG3 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Vcpip1Q8CDG3 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vcpip1Q8CDG3 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vcpip1Q8CDG3 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vcpip1Q8CDG3 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vcpip1Q8CDG3 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vcpip1Q8CDG3 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Vcpip1Q8CDG3 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vcpip1Q8CDG3 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vcpip1Q8CDG3 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.76■□□□□ 0.43
Vcpip1Q8CDG3 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vcpip1Q8CDG3 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vcpip1Q8CDG3 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Vcpip1Q8CDG3 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Vcpip1Q8CDG3 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.75■□□□□ 0.43
Vcpip1Q8CDG3 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Vcpip1Q8CDG3 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vcpip1Q8CDG3 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vcpip1Q8CDG3 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vcpip1Q8CDG3 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vcpip1Q8CDG3 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vcpip1Q8CDG3 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms