Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC25.59■■□□□ 1.69
Pabpn1Q8CCS6 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Pabpn1Q8CCS6 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC25.59■■□□□ 1.69
Pabpn1Q8CCS6 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Pabpn1Q8CCS6 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
Pabpn1Q8CCS6 CT025626.1-201ENSMUST00000223735 1455 ntBASIC25.59■■□□□ 1.69
Pabpn1Q8CCS6 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
Pabpn1Q8CCS6 Gm15743-202ENSMUST00000182690 1901 ntBASIC25.59■■□□□ 1.69
Pabpn1Q8CCS6 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Pabpn1Q8CCS6 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Pabpn1Q8CCS6 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Pabpn1Q8CCS6 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Pabpn1Q8CCS6 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Pabpn1Q8CCS6 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Pabpn1Q8CCS6 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC25.58■■□□□ 1.69
Pabpn1Q8CCS6 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Pabpn1Q8CCS6 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Pabpn1Q8CCS6 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
Pabpn1Q8CCS6 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pabpn1Q8CCS6 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Pabpn1Q8CCS6 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pabpn1Q8CCS6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pabpn1Q8CCS6 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pabpn1Q8CCS6 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pabpn1Q8CCS6 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
Pabpn1Q8CCS6 Mir8102-201ENSMUST00000184148 139 ntBASIC25.57■■□□□ 1.68
Pabpn1Q8CCS6 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pabpn1Q8CCS6 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC25.57■■□□□ 1.68
Pabpn1Q8CCS6 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pabpn1Q8CCS6 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pabpn1Q8CCS6 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pabpn1Q8CCS6 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pabpn1Q8CCS6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pabpn1Q8CCS6 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pabpn1Q8CCS6 Gm12490-201ENSMUST00000120255 560 ntBASIC25.56■■□□□ 1.68
Pabpn1Q8CCS6 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC25.56■■□□□ 1.68
Pabpn1Q8CCS6 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Pabpn1Q8CCS6 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Pabpn1Q8CCS6 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Pabpn1Q8CCS6 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Pabpn1Q8CCS6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Pabpn1Q8CCS6 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Pabpn1Q8CCS6 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Pabpn1Q8CCS6 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Pabpn1Q8CCS6 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
Pabpn1Q8CCS6 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Pabpn1Q8CCS6 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Pabpn1Q8CCS6 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Pabpn1Q8CCS6 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Pabpn1Q8CCS6 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
Pabpn1Q8CCS6 Gm13223-201ENSMUST00000118609 747 ntBASIC25.55■■□□□ 1.68
Pabpn1Q8CCS6 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC25.55■■□□□ 1.68
Pabpn1Q8CCS6 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC25.55■■□□□ 1.68
Pabpn1Q8CCS6 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC25.55■■□□□ 1.68
Pabpn1Q8CCS6 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC25.55■■□□□ 1.68
Pabpn1Q8CCS6 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Pabpn1Q8CCS6 Gpr146-202ENSMUST00000053120 1040 ntBASIC25.55■■□□□ 1.68
Pabpn1Q8CCS6 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
Pabpn1Q8CCS6 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Pabpn1Q8CCS6 Gm43213-201ENSMUST00000151866 1790 ntBASIC25.54■■□□□ 1.68
Pabpn1Q8CCS6 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pabpn1Q8CCS6 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Pabpn1Q8CCS6 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pabpn1Q8CCS6 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pabpn1Q8CCS6 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC25.54■■□□□ 1.68
Pabpn1Q8CCS6 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC25.54■■□□□ 1.68
Pabpn1Q8CCS6 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC25.54■■□□□ 1.68
Pabpn1Q8CCS6 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Pabpn1Q8CCS6 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pabpn1Q8CCS6 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pabpn1Q8CCS6 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pabpn1Q8CCS6 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC25.54■■□□□ 1.68
Pabpn1Q8CCS6 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pabpn1Q8CCS6 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pabpn1Q8CCS6 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Pabpn1Q8CCS6 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
Pabpn1Q8CCS6 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pabpn1Q8CCS6 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pabpn1Q8CCS6 Best4-ps-201ENSMUST00000129783 1380 ntBASIC25.54■■□□□ 1.68
Pabpn1Q8CCS6 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Pabpn1Q8CCS6 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
Pabpn1Q8CCS6 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
Pabpn1Q8CCS6 Gm7488-201ENSMUST00000117148 684 ntBASIC25.53■■□□□ 1.68
Pabpn1Q8CCS6 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Pabpn1Q8CCS6 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC25.53■■□□□ 1.68
Pabpn1Q8CCS6 Gm7787-201ENSMUST00000216858 688 ntBASIC25.53■■□□□ 1.68
Pabpn1Q8CCS6 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Pabpn1Q8CCS6 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
Pabpn1Q8CCS6 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Pabpn1Q8CCS6 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC25.52■■□□□ 1.68
Pabpn1Q8CCS6 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
Pabpn1Q8CCS6 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC25.52■■□□□ 1.68
Pabpn1Q8CCS6 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC25.52■■□□□ 1.68
Pabpn1Q8CCS6 Mir6420-201ENSMUST00000185032 102 ntBASIC25.52■■□□□ 1.68
Pabpn1Q8CCS6 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC25.52■■□□□ 1.68
Pabpn1Q8CCS6 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Pabpn1Q8CCS6 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Pabpn1Q8CCS6 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Pabpn1Q8CCS6 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Pabpn1Q8CCS6 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms