Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf31Q8CCF0 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf31Q8CCF0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf31Q8CCF0 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf31Q8CCF0 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf31Q8CCF0 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.09■□□□□ 0.49
Prpf31Q8CCF0 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.09■□□□□ 0.49
Prpf31Q8CCF0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf31Q8CCF0 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf31Q8CCF0 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf31Q8CCF0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf31Q8CCF0 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.09■□□□□ 0.49
Prpf31Q8CCF0 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Prpf31Q8CCF0 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Prpf31Q8CCF0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Prpf31Q8CCF0 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Prpf31Q8CCF0 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Prpf31Q8CCF0 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.08■□□□□ 0.49
Prpf31Q8CCF0 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Prpf31Q8CCF0 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Prpf31Q8CCF0 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Prpf31Q8CCF0 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Prpf31Q8CCF0 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prpf31Q8CCF0 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prpf31Q8CCF0 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
Prpf31Q8CCF0 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.08■□□□□ 0.48
Prpf31Q8CCF0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.08■□□□□ 0.48
Prpf31Q8CCF0 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Prpf31Q8CCF0 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Prpf31Q8CCF0 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prpf31Q8CCF0 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prpf31Q8CCF0 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.08■□□□□ 0.48
Prpf31Q8CCF0 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Prpf31Q8CCF0 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prpf31Q8CCF0 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prpf31Q8CCF0 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prpf31Q8CCF0 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Prpf31Q8CCF0 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.07■□□□□ 0.48
Prpf31Q8CCF0 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
Prpf31Q8CCF0 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf31Q8CCF0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Prpf31Q8CCF0 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.07■□□□□ 0.48
Prpf31Q8CCF0 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Prpf31Q8CCF0 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf31Q8CCF0 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf31Q8CCF0 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf31Q8CCF0 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.07■□□□□ 0.48
Prpf31Q8CCF0 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.07■□□□□ 0.48
Prpf31Q8CCF0 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf31Q8CCF0 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf31Q8CCF0 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18.07■□□□□ 0.48
Prpf31Q8CCF0 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf31Q8CCF0 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf31Q8CCF0 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.07■□□□□ 0.48
Prpf31Q8CCF0 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf31Q8CCF0 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf31Q8CCF0 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf31Q8CCF0 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Prpf31Q8CCF0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Prpf31Q8CCF0 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prpf31Q8CCF0 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.06■□□□□ 0.48
Prpf31Q8CCF0 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Prpf31Q8CCF0 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.06■□□□□ 0.48
Prpf31Q8CCF0 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.06■□□□□ 0.48
Prpf31Q8CCF0 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Prpf31Q8CCF0 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prpf31Q8CCF0 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Prpf31Q8CCF0 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prpf31Q8CCF0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Prpf31Q8CCF0 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Prpf31Q8CCF0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Prpf31Q8CCF0 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prpf31Q8CCF0 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
Prpf31Q8CCF0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prpf31Q8CCF0 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prpf31Q8CCF0 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prpf31Q8CCF0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prpf31Q8CCF0 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Prpf31Q8CCF0 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Prpf31Q8CCF0 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Prpf31Q8CCF0 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.05■□□□□ 0.48
Prpf31Q8CCF0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prpf31Q8CCF0 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prpf31Q8CCF0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Prpf31Q8CCF0 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.05■□□□□ 0.48
Prpf31Q8CCF0 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.05■□□□□ 0.48
Prpf31Q8CCF0 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.05■□□□□ 0.48
Prpf31Q8CCF0 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prpf31Q8CCF0 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.05■□□□□ 0.48
Prpf31Q8CCF0 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prpf31Q8CCF0 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prpf31Q8CCF0 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Prpf31Q8CCF0 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Prpf31Q8CCF0 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prpf31Q8CCF0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Prpf31Q8CCF0 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.05■□□□□ 0.48
Prpf31Q8CCF0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Prpf31Q8CCF0 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prpf31Q8CCF0 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Prpf31Q8CCF0 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms