Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Uba3Q8C878 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Uba3Q8C878 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Uba3Q8C878 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Uba3Q8C878 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Uba3Q8C878 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Uba3Q8C878 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Uba3Q8C878 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.43■□□□□ 0.38
Uba3Q8C878 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Uba3Q8C878 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Uba3Q8C878 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Uba3Q8C878 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Uba3Q8C878 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Uba3Q8C878 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Uba3Q8C878 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Uba3Q8C878 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.43■□□□□ 0.38
Uba3Q8C878 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Uba3Q8C878 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Uba3Q8C878 Gm5587-201ENSMUST00000206270 674 ntBASIC17.43■□□□□ 0.38
Uba3Q8C878 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Uba3Q8C878 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.43■□□□□ 0.38
Uba3Q8C878 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Uba3Q8C878 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Uba3Q8C878 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Uba3Q8C878 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
Uba3Q8C878 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Uba3Q8C878 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Uba3Q8C878 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Uba3Q8C878 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.43■□□□□ 0.38
Uba3Q8C878 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Uba3Q8C878 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Uba3Q8C878 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Uba3Q8C878 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Uba3Q8C878 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Uba3Q8C878 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Uba3Q8C878 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Uba3Q8C878 Mir770-201ENSMUST00000103252 94 ntBASIC17.42■□□□□ 0.38
Uba3Q8C878 Gm9013-201ENSMUST00000132939 882 ntBASIC17.42■□□□□ 0.38
Uba3Q8C878 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.42■□□□□ 0.38
Uba3Q8C878 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.42■□□□□ 0.38
Uba3Q8C878 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.42■□□□□ 0.38
Uba3Q8C878 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.42■□□□□ 0.38
Uba3Q8C878 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Uba3Q8C878 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Uba3Q8C878 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Uba3Q8C878 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Uba3Q8C878 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Uba3Q8C878 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Uba3Q8C878 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Uba3Q8C878 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Uba3Q8C878 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Uba3Q8C878 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Uba3Q8C878 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Uba3Q8C878 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Uba3Q8C878 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Uba3Q8C878 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Uba3Q8C878 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Uba3Q8C878 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.41■□□□□ 0.38
Uba3Q8C878 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Uba3Q8C878 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Uba3Q8C878 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Uba3Q8C878 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Uba3Q8C878 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Uba3Q8C878 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Uba3Q8C878 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.41■□□□□ 0.38
Uba3Q8C878 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.41■□□□□ 0.38
Uba3Q8C878 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Uba3Q8C878 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Uba3Q8C878 Gm6345-202ENSMUST00000180900 204 ntBASIC17.41■□□□□ 0.38
Uba3Q8C878 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Uba3Q8C878 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Uba3Q8C878 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Uba3Q8C878 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.41■□□□□ 0.38
Uba3Q8C878 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Uba3Q8C878 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Uba3Q8C878 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.41■□□□□ 0.38
Uba3Q8C878 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.41■□□□□ 0.38
Uba3Q8C878 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Uba3Q8C878 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Uba3Q8C878 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Uba3Q8C878 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Uba3Q8C878 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.4■□□□□ 0.38
Uba3Q8C878 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Uba3Q8C878 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Uba3Q8C878 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Uba3Q8C878 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Uba3Q8C878 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Uba3Q8C878 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Uba3Q8C878 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Uba3Q8C878 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.4■□□□□ 0.38
Uba3Q8C878 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Uba3Q8C878 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Uba3Q8C878 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Uba3Q8C878 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Uba3Q8C878 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Uba3Q8C878 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Uba3Q8C878 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Uba3Q8C878 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Uba3Q8C878 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Uba3Q8C878 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms