Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cfap54Q8C6S9 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.82■□□□□ 0.12
Cfap54Q8C6S9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cfap54Q8C6S9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cfap54Q8C6S9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cfap54Q8C6S9 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cfap54Q8C6S9 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cfap54Q8C6S9 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cfap54Q8C6S9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cfap54Q8C6S9 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.81■□□□□ 0.12
Cfap54Q8C6S9 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cfap54Q8C6S9 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cfap54Q8C6S9 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Cfap54Q8C6S9 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cfap54Q8C6S9 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.81■□□□□ 0.12
Cfap54Q8C6S9 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cfap54Q8C6S9 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cfap54Q8C6S9 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.81■□□□□ 0.12
Cfap54Q8C6S9 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cfap54Q8C6S9 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Cfap54Q8C6S9 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.81■□□□□ 0.12
Cfap54Q8C6S9 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.81■□□□□ 0.12
Cfap54Q8C6S9 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Cfap54Q8C6S9 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.81■□□□□ 0.12
Cfap54Q8C6S9 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cfap54Q8C6S9 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cfap54Q8C6S9 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.81■□□□□ 0.12
Cfap54Q8C6S9 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cfap54Q8C6S9 Mir6956-201ENSMUST00000183598 62 ntBASIC15.81■□□□□ 0.12
Cfap54Q8C6S9 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cfap54Q8C6S9 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cfap54Q8C6S9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cfap54Q8C6S9 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cfap54Q8C6S9 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cfap54Q8C6S9 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cfap54Q8C6S9 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cfap54Q8C6S9 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
Cfap54Q8C6S9 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.8■□□□□ 0.12
Cfap54Q8C6S9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cfap54Q8C6S9 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cfap54Q8C6S9 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Cfap54Q8C6S9 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cfap54Q8C6S9 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Cfap54Q8C6S9 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Cfap54Q8C6S9 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cfap54Q8C6S9 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cfap54Q8C6S9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cfap54Q8C6S9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cfap54Q8C6S9 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Cfap54Q8C6S9 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Cfap54Q8C6S9 Mir8117-201ENSMUST00000184773 107 ntBASIC15.79■□□□□ 0.12
Cfap54Q8C6S9 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.79■□□□□ 0.12
Cfap54Q8C6S9 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cfap54Q8C6S9 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cfap54Q8C6S9 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cfap54Q8C6S9 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cfap54Q8C6S9 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Cfap54Q8C6S9 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cfap54Q8C6S9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.79■□□□□ 0.12
Cfap54Q8C6S9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cfap54Q8C6S9 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cfap54Q8C6S9 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cfap54Q8C6S9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.79■□□□□ 0.12
Cfap54Q8C6S9 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cfap54Q8C6S9 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.79■□□□□ 0.12
Cfap54Q8C6S9 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cfap54Q8C6S9 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cfap54Q8C6S9 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cfap54Q8C6S9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cfap54Q8C6S9 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.78■□□□□ 0.12
Cfap54Q8C6S9 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.78■□□□□ 0.12
Cfap54Q8C6S9 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cfap54Q8C6S9 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.78■□□□□ 0.12
Cfap54Q8C6S9 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
Cfap54Q8C6S9 Gm8396-201ENSMUST00000057361 823 ntBASIC15.78■□□□□ 0.12
Cfap54Q8C6S9 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cfap54Q8C6S9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.78■□□□□ 0.12
Cfap54Q8C6S9 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cfap54Q8C6S9 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cfap54Q8C6S9 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cfap54Q8C6S9 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.78■□□□□ 0.12
Cfap54Q8C6S9 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.78■□□□□ 0.12
Cfap54Q8C6S9 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.78■□□□□ 0.12
Cfap54Q8C6S9 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Cfap54Q8C6S9 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cfap54Q8C6S9 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cfap54Q8C6S9 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Cfap54Q8C6S9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cfap54Q8C6S9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cfap54Q8C6S9 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Cfap54Q8C6S9 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cfap54Q8C6S9 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.77■□□□□ 0.12
Cfap54Q8C6S9 AA543401-201ENSMUST00000164248 1269 ntBASIC15.77■□□□□ 0.12
Cfap54Q8C6S9 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.77■□□□□ 0.12
Cfap54Q8C6S9 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cfap54Q8C6S9 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Cfap54Q8C6S9 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cfap54Q8C6S9 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Cfap54Q8C6S9 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.77■□□□□ 0.12
Cfap54Q8C6S9 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms