Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Cps1Q8C196 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cps1Q8C196 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cps1Q8C196 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC22.2■■□□□ 1.14
Cps1Q8C196 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Cps1Q8C196 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Cps1Q8C196 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
Cps1Q8C196 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cps1Q8C196 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cps1Q8C196 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cps1Q8C196 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC22.2■■□□□ 1.14
Cps1Q8C196 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Cps1Q8C196 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC22.2■■□□□ 1.14
Cps1Q8C196 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC22.2■■□□□ 1.14
Cps1Q8C196 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
Cps1Q8C196 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cps1Q8C196 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cps1Q8C196 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cps1Q8C196 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Cps1Q8C196 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Cps1Q8C196 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cps1Q8C196 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC22.19■■□□□ 1.14
Cps1Q8C196 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC22.19■■□□□ 1.14
Cps1Q8C196 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Cps1Q8C196 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC22.19■■□□□ 1.14
Cps1Q8C196 Gm37153-201ENSMUST00000193637 231 ntBASIC22.19■■□□□ 1.14
Cps1Q8C196 AC174742.1-201ENSMUST00000218272 304 ntBASIC22.19■■□□□ 1.14
Cps1Q8C196 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cps1Q8C196 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cps1Q8C196 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Cps1Q8C196 Gm42939-201ENSMUST00000197514 2205 ntBASIC22.19■■□□□ 1.14
Cps1Q8C196 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cps1Q8C196 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cps1Q8C196 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cps1Q8C196 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cps1Q8C196 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC22.18■■□□□ 1.14
Cps1Q8C196 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cps1Q8C196 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cps1Q8C196 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cps1Q8C196 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Cps1Q8C196 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Cps1Q8C196 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC22.17■■□□□ 1.14
Cps1Q8C196 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC22.17■■□□□ 1.14
Cps1Q8C196 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cps1Q8C196 Gm7063-201ENSMUST00000186840 981 ntBASIC22.17■■□□□ 1.14
Cps1Q8C196 Gm10576-201ENSMUST00000191927 825 ntBASIC22.17■■□□□ 1.14
Cps1Q8C196 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC22.17■■□□□ 1.14
Cps1Q8C196 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Cps1Q8C196 Gm18622-201ENSMUST00000219361 595 ntBASIC22.17■■□□□ 1.14
Cps1Q8C196 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cps1Q8C196 Gm15500-202ENSMUST00000071641 1019 ntBASIC22.17■■□□□ 1.14
Cps1Q8C196 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cps1Q8C196 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Cps1Q8C196 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC22.17■■□□□ 1.14
Cps1Q8C196 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Cps1Q8C196 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cps1Q8C196 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cps1Q8C196 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cps1Q8C196 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cps1Q8C196 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC22.16■■□□□ 1.14
Cps1Q8C196 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC22.16■■□□□ 1.14
Cps1Q8C196 AC124549.3-201ENSMUST00000225541 367 ntBASIC22.16■■□□□ 1.14
Cps1Q8C196 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cps1Q8C196 Gm5112-201ENSMUST00000204407 2368 ntBASIC22.16■■□□□ 1.14
Cps1Q8C196 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cps1Q8C196 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cps1Q8C196 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cps1Q8C196 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Cps1Q8C196 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cps1Q8C196 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cps1Q8C196 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cps1Q8C196 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Cps1Q8C196 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC22.16■■□□□ 1.14
Cps1Q8C196 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cps1Q8C196 Gm4913-201ENSMUST00000117075 1290 ntBASIC22.16■■□□□ 1.14
Cps1Q8C196 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC22.16■■□□□ 1.14
Cps1Q8C196 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Cps1Q8C196 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cps1Q8C196 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cps1Q8C196 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cps1Q8C196 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Cps1Q8C196 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Cps1Q8C196 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Cps1Q8C196 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
Cps1Q8C196 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cps1Q8C196 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
Cps1Q8C196 Gm13597-201ENSMUST00000121239 375 ntBASIC22.15■■□□□ 1.14
Cps1Q8C196 Gm26308-201ENSMUST00000157768 69 ntBASIC22.15■■□□□ 1.14
Cps1Q8C196 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC22.15■■□□□ 1.14
Cps1Q8C196 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cps1Q8C196 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Cps1Q8C196 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Cps1Q8C196 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
Cps1Q8C196 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cps1Q8C196 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC22.14■■□□□ 1.13
Cps1Q8C196 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
Cps1Q8C196 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Cps1Q8C196 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC22.14■■□□□ 1.13
Cps1Q8C196 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Cps1Q8C196 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms