Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.93■□□□□ 0.3
Nup54Q8BTS4 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup54Q8BTS4 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Nup54Q8BTS4 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup54Q8BTS4 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup54Q8BTS4 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup54Q8BTS4 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nup54Q8BTS4 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Nup54Q8BTS4 Gm27742-201ENSMUST00000184667 60 ntBASIC16.93■□□□□ 0.3
Nup54Q8BTS4 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.93■□□□□ 0.3
Nup54Q8BTS4 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup54Q8BTS4 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup54Q8BTS4 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup54Q8BTS4 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup54Q8BTS4 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup54Q8BTS4 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.93■□□□□ 0.3
Nup54Q8BTS4 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup54Q8BTS4 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nup54Q8BTS4 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup54Q8BTS4 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup54Q8BTS4 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup54Q8BTS4 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup54Q8BTS4 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Nup54Q8BTS4 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup54Q8BTS4 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup54Q8BTS4 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup54Q8BTS4 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup54Q8BTS4 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup54Q8BTS4 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup54Q8BTS4 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Nup54Q8BTS4 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
Nup54Q8BTS4 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup54Q8BTS4 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Nup54Q8BTS4 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup54Q8BTS4 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nup54Q8BTS4 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup54Q8BTS4 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup54Q8BTS4 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nup54Q8BTS4 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup54Q8BTS4 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nup54Q8BTS4 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.92■□□□□ 0.3
Nup54Q8BTS4 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Nup54Q8BTS4 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup54Q8BTS4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup54Q8BTS4 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup54Q8BTS4 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup54Q8BTS4 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Nup54Q8BTS4 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup54Q8BTS4 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup54Q8BTS4 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.91■□□□□ 0.3
Nup54Q8BTS4 Gm13216-201ENSMUST00000117145 591 ntBASIC16.91■□□□□ 0.3
Nup54Q8BTS4 Olfr129-201ENSMUST00000122318 993 ntBASIC16.91■□□□□ 0.3
Nup54Q8BTS4 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nup54Q8BTS4 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nup54Q8BTS4 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nup54Q8BTS4 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup54Q8BTS4 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup54Q8BTS4 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup54Q8BTS4 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup54Q8BTS4 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup54Q8BTS4 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup54Q8BTS4 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Nup54Q8BTS4 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.9■□□□□ 0.3
Nup54Q8BTS4 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nup54Q8BTS4 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Nup54Q8BTS4 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nup54Q8BTS4 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.9■□□□□ 0.3
Nup54Q8BTS4 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nup54Q8BTS4 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nup54Q8BTS4 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nup54Q8BTS4 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.9■□□□□ 0.3
Nup54Q8BTS4 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.9■□□□□ 0.3
Nup54Q8BTS4 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nup54Q8BTS4 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nup54Q8BTS4 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Nup54Q8BTS4 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nup54Q8BTS4 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Nup54Q8BTS4 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nup54Q8BTS4 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nup54Q8BTS4 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Nup54Q8BTS4 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nup54Q8BTS4 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.9■□□□□ 0.3
Nup54Q8BTS4 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.9■□□□□ 0.3
Nup54Q8BTS4 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nup54Q8BTS4 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nup54Q8BTS4 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.89■□□□□ 0.29
Nup54Q8BTS4 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nup54Q8BTS4 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nup54Q8BTS4 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nup54Q8BTS4 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nup54Q8BTS4 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.89■□□□□ 0.29
Nup54Q8BTS4 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nup54Q8BTS4 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Nup54Q8BTS4 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nup54Q8BTS4 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nup54Q8BTS4 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nup54Q8BTS4 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Nup54Q8BTS4 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nup54Q8BTS4 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nup54Q8BTS4 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms