Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Suds3Q8BR65 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.02■□□□□ 0.31
Suds3Q8BR65 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Suds3Q8BR65 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Suds3Q8BR65 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Suds3Q8BR65 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC17.01■□□□□ 0.31
Suds3Q8BR65 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Suds3Q8BR65 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Suds3Q8BR65 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.01■□□□□ 0.31
Suds3Q8BR65 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Suds3Q8BR65 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Suds3Q8BR65 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Suds3Q8BR65 Gm10231-201ENSMUST00000181584 441 ntBASIC17.01■□□□□ 0.31
Suds3Q8BR65 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.01■□□□□ 0.31
Suds3Q8BR65 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Suds3Q8BR65 Gm7977-201ENSMUST00000193787 748 ntBASIC17.01■□□□□ 0.31
Suds3Q8BR65 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.01■□□□□ 0.31
Suds3Q8BR65 Gm10175-202ENSMUST00000208752 441 ntBASIC17.01■□□□□ 0.31
Suds3Q8BR65 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.01■□□□□ 0.31
Suds3Q8BR65 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.01■□□□□ 0.31
Suds3Q8BR65 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Suds3Q8BR65 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Suds3Q8BR65 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Suds3Q8BR65 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Suds3Q8BR65 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Suds3Q8BR65 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Suds3Q8BR65 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Suds3Q8BR65 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Suds3Q8BR65 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Suds3Q8BR65 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Suds3Q8BR65 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Suds3Q8BR65 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Suds3Q8BR65 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Suds3Q8BR65 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Suds3Q8BR65 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17■□□□□ 0.31
Suds3Q8BR65 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Suds3Q8BR65 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Suds3Q8BR65 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17■□□□□ 0.31
Suds3Q8BR65 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Suds3Q8BR65 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Suds3Q8BR65 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Suds3Q8BR65 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17■□□□□ 0.31
Suds3Q8BR65 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17■□□□□ 0.31
Suds3Q8BR65 Gm17661-201ENSMUST00000170317 270 ntBASIC17■□□□□ 0.31
Suds3Q8BR65 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17■□□□□ 0.31
Suds3Q8BR65 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Suds3Q8BR65 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Suds3Q8BR65 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Suds3Q8BR65 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Suds3Q8BR65 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Suds3Q8BR65 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Suds3Q8BR65 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Suds3Q8BR65 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17■□□□□ 0.31
Suds3Q8BR65 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Suds3Q8BR65 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Suds3Q8BR65 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Suds3Q8BR65 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Suds3Q8BR65 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Suds3Q8BR65 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Suds3Q8BR65 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.99■□□□□ 0.31
Suds3Q8BR65 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Suds3Q8BR65 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Suds3Q8BR65 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Suds3Q8BR65 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Suds3Q8BR65 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Suds3Q8BR65 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Suds3Q8BR65 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Suds3Q8BR65 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Suds3Q8BR65 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Suds3Q8BR65 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Suds3Q8BR65 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Suds3Q8BR65 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Suds3Q8BR65 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Suds3Q8BR65 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Suds3Q8BR65 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Suds3Q8BR65 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Suds3Q8BR65 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Suds3Q8BR65 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Suds3Q8BR65 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Suds3Q8BR65 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Suds3Q8BR65 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Suds3Q8BR65 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Suds3Q8BR65 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.97■□□□□ 0.31
Suds3Q8BR65 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Suds3Q8BR65 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Suds3Q8BR65 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Suds3Q8BR65 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Suds3Q8BR65 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Suds3Q8BR65 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Suds3Q8BR65 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Suds3Q8BR65 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Suds3Q8BR65 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Suds3Q8BR65 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.97■□□□□ 0.31
Suds3Q8BR65 Gm18959-201ENSMUST00000208954 655 ntBASIC16.97■□□□□ 0.31
Suds3Q8BR65 Gm9731-201ENSMUST00000209480 747 ntBASIC16.97■□□□□ 0.31
Suds3Q8BR65 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
Suds3Q8BR65 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Suds3Q8BR65 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Suds3Q8BR65 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Suds3Q8BR65 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms