Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdhr3Q8BL00 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdhr3Q8BL00 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdhr3Q8BL00 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdhr3Q8BL00 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdhr3Q8BL00 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdhr3Q8BL00 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdhr3Q8BL00 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdhr3Q8BL00 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdhr3Q8BL00 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdhr3Q8BL00 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdhr3Q8BL00 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.46□□□□□ -0.09
Cdhr3Q8BL00 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdhr3Q8BL00 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdhr3Q8BL00 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Cdhr3Q8BL00 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdhr3Q8BL00 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdhr3Q8BL00 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Cdhr3Q8BL00 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdhr3Q8BL00 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdhr3Q8BL00 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdhr3Q8BL00 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cdhr3Q8BL00 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cdhr3Q8BL00 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cdhr3Q8BL00 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdhr3Q8BL00 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdhr3Q8BL00 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.46□□□□□ -0.1
Cdhr3Q8BL00 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdhr3Q8BL00 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.45□□□□□ -0.1
Cdhr3Q8BL00 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdhr3Q8BL00 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdhr3Q8BL00 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdhr3Q8BL00 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.45□□□□□ -0.1
Cdhr3Q8BL00 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.45□□□□□ -0.1
Cdhr3Q8BL00 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdhr3Q8BL00 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.45□□□□□ -0.1
Cdhr3Q8BL00 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.45□□□□□ -0.1
Cdhr3Q8BL00 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC14.45□□□□□ -0.1
Cdhr3Q8BL00 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdhr3Q8BL00 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.45□□□□□ -0.1
Cdhr3Q8BL00 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdhr3Q8BL00 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.45□□□□□ -0.1
Cdhr3Q8BL00 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.45□□□□□ -0.1
Cdhr3Q8BL00 Slc35b2-207ENSMUST00000226086 850 ntBASIC14.45□□□□□ -0.1
Cdhr3Q8BL00 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdhr3Q8BL00 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdhr3Q8BL00 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.45□□□□□ -0.1
Cdhr3Q8BL00 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdhr3Q8BL00 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdhr3Q8BL00 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdhr3Q8BL00 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdhr3Q8BL00 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.45□□□□□ -0.1
Cdhr3Q8BL00 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdhr3Q8BL00 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
Cdhr3Q8BL00 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdhr3Q8BL00 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdhr3Q8BL00 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdhr3Q8BL00 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdhr3Q8BL00 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdhr3Q8BL00 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cdhr3Q8BL00 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdhr3Q8BL00 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.45□□□□□ -0.1
Cdhr3Q8BL00 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdhr3Q8BL00 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdhr3Q8BL00 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdhr3Q8BL00 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdhr3Q8BL00 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdhr3Q8BL00 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdhr3Q8BL00 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdhr3Q8BL00 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.44□□□□□ -0.1
Cdhr3Q8BL00 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdhr3Q8BL00 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdhr3Q8BL00 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.44□□□□□ -0.1
Cdhr3Q8BL00 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.44□□□□□ -0.1
Cdhr3Q8BL00 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.44□□□□□ -0.1
Cdhr3Q8BL00 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdhr3Q8BL00 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdhr3Q8BL00 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdhr3Q8BL00 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdhr3Q8BL00 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdhr3Q8BL00 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdhr3Q8BL00 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdhr3Q8BL00 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdhr3Q8BL00 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdhr3Q8BL00 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.44□□□□□ -0.1
Cdhr3Q8BL00 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.43□□□□□ -0.1
Cdhr3Q8BL00 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Cdhr3Q8BL00 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Cdhr3Q8BL00 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdhr3Q8BL00 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdhr3Q8BL00 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdhr3Q8BL00 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Cdhr3Q8BL00 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdhr3Q8BL00 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Cdhr3Q8BL00 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cdhr3Q8BL00 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdhr3Q8BL00 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdhr3Q8BL00 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Cdhr3Q8BL00 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdhr3Q8BL00 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms