Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nop53Q8BK35 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Nop53Q8BK35 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nop53Q8BK35 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nop53Q8BK35 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nop53Q8BK35 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nop53Q8BK35 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nop53Q8BK35 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nop53Q8BK35 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nop53Q8BK35 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nop53Q8BK35 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.74■□□□□ 0.43
Nop53Q8BK35 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nop53Q8BK35 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Nop53Q8BK35 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nop53Q8BK35 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nop53Q8BK35 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nop53Q8BK35 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.74■□□□□ 0.43
Nop53Q8BK35 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Nop53Q8BK35 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.74■□□□□ 0.43
Nop53Q8BK35 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nop53Q8BK35 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Nop53Q8BK35 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nop53Q8BK35 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Nop53Q8BK35 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nop53Q8BK35 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nop53Q8BK35 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Nop53Q8BK35 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nop53Q8BK35 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.74■□□□□ 0.43
Nop53Q8BK35 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nop53Q8BK35 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nop53Q8BK35 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nop53Q8BK35 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nop53Q8BK35 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nop53Q8BK35 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Nop53Q8BK35 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nop53Q8BK35 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nop53Q8BK35 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nop53Q8BK35 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nop53Q8BK35 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.73■□□□□ 0.43
Nop53Q8BK35 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nop53Q8BK35 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nop53Q8BK35 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Nop53Q8BK35 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nop53Q8BK35 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Nop53Q8BK35 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.73■□□□□ 0.43
Nop53Q8BK35 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nop53Q8BK35 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Nop53Q8BK35 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Nop53Q8BK35 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nop53Q8BK35 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nop53Q8BK35 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nop53Q8BK35 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.73■□□□□ 0.43
Nop53Q8BK35 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nop53Q8BK35 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Nop53Q8BK35 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nop53Q8BK35 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.73■□□□□ 0.43
Nop53Q8BK35 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.73■□□□□ 0.43
Nop53Q8BK35 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nop53Q8BK35 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Nop53Q8BK35 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nop53Q8BK35 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nop53Q8BK35 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nop53Q8BK35 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.72■□□□□ 0.43
Nop53Q8BK35 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nop53Q8BK35 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nop53Q8BK35 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nop53Q8BK35 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nop53Q8BK35 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nop53Q8BK35 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nop53Q8BK35 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nop53Q8BK35 Gm7638-201ENSMUST00000121348 967 ntBASIC17.72■□□□□ 0.43
Nop53Q8BK35 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.72■□□□□ 0.43
Nop53Q8BK35 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.72■□□□□ 0.43
Nop53Q8BK35 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nop53Q8BK35 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nop53Q8BK35 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Nop53Q8BK35 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nop53Q8BK35 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nop53Q8BK35 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nop53Q8BK35 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Nop53Q8BK35 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Nop53Q8BK35 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nop53Q8BK35 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nop53Q8BK35 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nop53Q8BK35 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nop53Q8BK35 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nop53Q8BK35 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nop53Q8BK35 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nop53Q8BK35 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nop53Q8BK35 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nop53Q8BK35 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nop53Q8BK35 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.71■□□□□ 0.43
Nop53Q8BK35 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.71■□□□□ 0.43
Nop53Q8BK35 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nop53Q8BK35 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.71■□□□□ 0.43
Nop53Q8BK35 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nop53Q8BK35 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nop53Q8BK35 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Nop53Q8BK35 Gm27000-201ENSMUST00000182943 842 ntBASIC17.71■□□□□ 0.43
Nop53Q8BK35 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms