Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.58■□□□□ 0.4
Smarcal1Q8BJL0 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Smarcal1Q8BJL0 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcal1Q8BJL0 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcal1Q8BJL0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Smarcal1Q8BJL0 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcal1Q8BJL0 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcal1Q8BJL0 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcal1Q8BJL0 Gm1401-201ENSMUST00000122048 772 ntBASIC17.57■□□□□ 0.4
Smarcal1Q8BJL0 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.57■□□□□ 0.4
Smarcal1Q8BJL0 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcal1Q8BJL0 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.57■□□□□ 0.4
Smarcal1Q8BJL0 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.57■□□□□ 0.4
Smarcal1Q8BJL0 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcal1Q8BJL0 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.57■□□□□ 0.4
Smarcal1Q8BJL0 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.57■□□□□ 0.4
Smarcal1Q8BJL0 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcal1Q8BJL0 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcal1Q8BJL0 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcal1Q8BJL0 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Smarcal1Q8BJL0 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Smarcal1Q8BJL0 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Smarcal1Q8BJL0 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Smarcal1Q8BJL0 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Smarcal1Q8BJL0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcal1Q8BJL0 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcal1Q8BJL0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcal1Q8BJL0 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcal1Q8BJL0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
Smarcal1Q8BJL0 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcal1Q8BJL0 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcal1Q8BJL0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcal1Q8BJL0 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.56■□□□□ 0.4
Smarcal1Q8BJL0 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.56■□□□□ 0.4
Smarcal1Q8BJL0 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcal1Q8BJL0 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.56■□□□□ 0.4
Smarcal1Q8BJL0 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.56■□□□□ 0.4
Smarcal1Q8BJL0 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.56■□□□□ 0.4
Smarcal1Q8BJL0 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Smarcal1Q8BJL0 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcal1Q8BJL0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcal1Q8BJL0 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcal1Q8BJL0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcal1Q8BJL0 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcal1Q8BJL0 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcal1Q8BJL0 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Smarcal1Q8BJL0 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcal1Q8BJL0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcal1Q8BJL0 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.55■□□□□ 0.4
Smarcal1Q8BJL0 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcal1Q8BJL0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcal1Q8BJL0 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcal1Q8BJL0 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcal1Q8BJL0 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcal1Q8BJL0 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcal1Q8BJL0 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcal1Q8BJL0 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.55■□□□□ 0.4
Smarcal1Q8BJL0 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcal1Q8BJL0 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.55■□□□□ 0.4
Smarcal1Q8BJL0 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcal1Q8BJL0 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcal1Q8BJL0 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcal1Q8BJL0 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.55■□□□□ 0.4
Smarcal1Q8BJL0 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcal1Q8BJL0 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcal1Q8BJL0 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcal1Q8BJL0 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Smarcal1Q8BJL0 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.55■□□□□ 0.4
Smarcal1Q8BJL0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcal1Q8BJL0 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Smarcal1Q8BJL0 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Smarcal1Q8BJL0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcal1Q8BJL0 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.54■□□□□ 0.4
Smarcal1Q8BJL0 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcal1Q8BJL0 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcal1Q8BJL0 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcal1Q8BJL0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcal1Q8BJL0 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcal1Q8BJL0 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Smarcal1Q8BJL0 Gm27525-201ENSMUST00000184465 107 ntBASIC17.54■□□□□ 0.4
Smarcal1Q8BJL0 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcal1Q8BJL0 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcal1Q8BJL0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcal1Q8BJL0 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcal1Q8BJL0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcal1Q8BJL0 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcal1Q8BJL0 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcal1Q8BJL0 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcal1Q8BJL0 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Smarcal1Q8BJL0 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcal1Q8BJL0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcal1Q8BJL0 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcal1Q8BJL0 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcal1Q8BJL0 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.53■□□□□ 0.4
Smarcal1Q8BJL0 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcal1Q8BJL0 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcal1Q8BJL0 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcal1Q8BJL0 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.53■□□□□ 0.4
Smarcal1Q8BJL0 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.53■□□□□ 0.4
Smarcal1Q8BJL0 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms