Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh20Q8BIZ0 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh20Q8BIZ0 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh20Q8BIZ0 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh20Q8BIZ0 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Pcdh20Q8BIZ0 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh20Q8BIZ0 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh20Q8BIZ0 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Pcdh20Q8BIZ0 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.18■□□□□ 0.18
Pcdh20Q8BIZ0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Pcdh20Q8BIZ0 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.18■□□□□ 0.18
Pcdh20Q8BIZ0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.18■□□□□ 0.18
Pcdh20Q8BIZ0 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.18■□□□□ 0.18
Pcdh20Q8BIZ0 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Pcdh20Q8BIZ0 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh20Q8BIZ0 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh20Q8BIZ0 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Pcdh20Q8BIZ0 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh20Q8BIZ0 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh20Q8BIZ0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh20Q8BIZ0 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.18■□□□□ 0.18
Pcdh20Q8BIZ0 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Pcdh20Q8BIZ0 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdh20Q8BIZ0 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh20Q8BIZ0 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh20Q8BIZ0 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh20Q8BIZ0 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh20Q8BIZ0 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh20Q8BIZ0 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh20Q8BIZ0 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh20Q8BIZ0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh20Q8BIZ0 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh20Q8BIZ0 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.17■□□□□ 0.18
Pcdh20Q8BIZ0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.17■□□□□ 0.18
Pcdh20Q8BIZ0 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh20Q8BIZ0 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh20Q8BIZ0 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh20Q8BIZ0 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh20Q8BIZ0 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Pcdh20Q8BIZ0 Gm9987-201ENSMUST00000069768 567 ntBASIC16.17■□□□□ 0.18
Pcdh20Q8BIZ0 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh20Q8BIZ0 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pcdh20Q8BIZ0 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.17■□□□□ 0.18
Pcdh20Q8BIZ0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh20Q8BIZ0 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh20Q8BIZ0 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh20Q8BIZ0 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh20Q8BIZ0 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh20Q8BIZ0 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh20Q8BIZ0 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Pcdh20Q8BIZ0 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdh20Q8BIZ0 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Pcdh20Q8BIZ0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh20Q8BIZ0 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Pcdh20Q8BIZ0 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh20Q8BIZ0 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdh20Q8BIZ0 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.16■□□□□ 0.18
Pcdh20Q8BIZ0 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.16■□□□□ 0.18
Pcdh20Q8BIZ0 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdh20Q8BIZ0 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh20Q8BIZ0 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Pcdh20Q8BIZ0 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh20Q8BIZ0 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh20Q8BIZ0 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Pcdh20Q8BIZ0 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh20Q8BIZ0 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh20Q8BIZ0 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh20Q8BIZ0 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdh20Q8BIZ0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh20Q8BIZ0 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Pcdh20Q8BIZ0 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.16■□□□□ 0.18
Pcdh20Q8BIZ0 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh20Q8BIZ0 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh20Q8BIZ0 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh20Q8BIZ0 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh20Q8BIZ0 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh20Q8BIZ0 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh20Q8BIZ0 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh20Q8BIZ0 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh20Q8BIZ0 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh20Q8BIZ0 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh20Q8BIZ0 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.15■□□□□ 0.18
Pcdh20Q8BIZ0 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh20Q8BIZ0 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh20Q8BIZ0 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Pcdh20Q8BIZ0 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh20Q8BIZ0 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
Pcdh20Q8BIZ0 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh20Q8BIZ0 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.15■□□□□ 0.18
Pcdh20Q8BIZ0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh20Q8BIZ0 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh20Q8BIZ0 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh20Q8BIZ0 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.15■□□□□ 0.18
Pcdh20Q8BIZ0 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Pcdh20Q8BIZ0 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.15■□□□□ 0.18
Pcdh20Q8BIZ0 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh20Q8BIZ0 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh20Q8BIZ0 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Pcdh20Q8BIZ0 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh20Q8BIZ0 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms