Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim50Q810I2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim50Q810I2 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.13■□□□□ 0.17
Trim50Q810I2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim50Q810I2 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim50Q810I2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim50Q810I2 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trim50Q810I2 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trim50Q810I2 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim50Q810I2 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim50Q810I2 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim50Q810I2 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim50Q810I2 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim50Q810I2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim50Q810I2 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trim50Q810I2 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim50Q810I2 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim50Q810I2 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim50Q810I2 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim50Q810I2 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.12■□□□□ 0.17
Trim50Q810I2 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim50Q810I2 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Trim50Q810I2 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.12■□□□□ 0.17
Trim50Q810I2 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.12■□□□□ 0.17
Trim50Q810I2 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.12■□□□□ 0.17
Trim50Q810I2 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim50Q810I2 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.12■□□□□ 0.17
Trim50Q810I2 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim50Q810I2 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim50Q810I2 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim50Q810I2 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim50Q810I2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim50Q810I2 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.12■□□□□ 0.17
Trim50Q810I2 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim50Q810I2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim50Q810I2 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.11■□□□□ 0.17
Trim50Q810I2 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.11■□□□□ 0.17
Trim50Q810I2 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim50Q810I2 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim50Q810I2 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Trim50Q810I2 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim50Q810I2 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim50Q810I2 Gm13836-201ENSMUST00000121159 501 ntBASIC16.11■□□□□ 0.17
Trim50Q810I2 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim50Q810I2 Gm10231-201ENSMUST00000181584 441 ntBASIC16.11■□□□□ 0.17
Trim50Q810I2 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim50Q810I2 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trim50Q810I2 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.11■□□□□ 0.17
Trim50Q810I2 Gm10175-202ENSMUST00000208752 441 ntBASIC16.11■□□□□ 0.17
Trim50Q810I2 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.11■□□□□ 0.17
Trim50Q810I2 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trim50Q810I2 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim50Q810I2 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim50Q810I2 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trim50Q810I2 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim50Q810I2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim50Q810I2 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trim50Q810I2 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Trim50Q810I2 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim50Q810I2 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim50Q810I2 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim50Q810I2 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim50Q810I2 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trim50Q810I2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim50Q810I2 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.1■□□□□ 0.17
Trim50Q810I2 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim50Q810I2 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim50Q810I2 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Trim50Q810I2 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim50Q810I2 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim50Q810I2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim50Q810I2 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim50Q810I2 Gm26039-201ENSMUST00000158152 144 ntBASIC16.1■□□□□ 0.17
Trim50Q810I2 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trim50Q810I2 Gm18115-201ENSMUST00000221209 621 ntBASIC16.1■□□□□ 0.17
Trim50Q810I2 Gm18032-201ENSMUST00000222541 538 ntBASIC16.1■□□□□ 0.17
Trim50Q810I2 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.1■□□□□ 0.17
Trim50Q810I2 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim50Q810I2 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
Trim50Q810I2 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Trim50Q810I2 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Trim50Q810I2 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim50Q810I2 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim50Q810I2 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Trim50Q810I2 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.1■□□□□ 0.17
Trim50Q810I2 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Trim50Q810I2 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim50Q810I2 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
Trim50Q810I2 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim50Q810I2 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim50Q810I2 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim50Q810I2 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim50Q810I2 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trim50Q810I2 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim50Q810I2 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim50Q810I2 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim50Q810I2 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trim50Q810I2 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim50Q810I2 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.09■□□□□ 0.17
Trim50Q810I2 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms