Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lrrtm4Q80XG9 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lrrtm4Q80XG9 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrrtm4Q80XG9 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrrtm4Q80XG9 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Lrrtm4Q80XG9 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lrrtm4Q80XG9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrrtm4Q80XG9 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Lrrtm4Q80XG9 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lrrtm4Q80XG9 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Lrrtm4Q80XG9 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lrrtm4Q80XG9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Lrrtm4Q80XG9 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lrrtm4Q80XG9 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Lrrtm4Q80XG9 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Lrrtm4Q80XG9 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.1■□□□□ 0.17
Lrrtm4Q80XG9 Gm27742-201ENSMUST00000184667 60 ntBASIC16.1■□□□□ 0.17
Lrrtm4Q80XG9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lrrtm4Q80XG9 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lrrtm4Q80XG9 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lrrtm4Q80XG9 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lrrtm4Q80XG9 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lrrtm4Q80XG9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lrrtm4Q80XG9 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lrrtm4Q80XG9 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lrrtm4Q80XG9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.1■□□□□ 0.17
Lrrtm4Q80XG9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrrtm4Q80XG9 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.09■□□□□ 0.17
Lrrtm4Q80XG9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrrtm4Q80XG9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Lrrtm4Q80XG9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrrtm4Q80XG9 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrrtm4Q80XG9 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Lrrtm4Q80XG9 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Lrrtm4Q80XG9 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrrtm4Q80XG9 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.09■□□□□ 0.17
Lrrtm4Q80XG9 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.09■□□□□ 0.17
Lrrtm4Q80XG9 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrrtm4Q80XG9 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrrtm4Q80XG9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrrtm4Q80XG9 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrrtm4Q80XG9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrrtm4Q80XG9 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrrtm4Q80XG9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrrtm4Q80XG9 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrrtm4Q80XG9 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.08■□□□□ 0.17
Lrrtm4Q80XG9 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.08■□□□□ 0.17
Lrrtm4Q80XG9 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Lrrtm4Q80XG9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Lrrtm4Q80XG9 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Lrrtm4Q80XG9 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lrrtm4Q80XG9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lrrtm4Q80XG9 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.08■□□□□ 0.16
Lrrtm4Q80XG9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Lrrtm4Q80XG9 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.08■□□□□ 0.16
Lrrtm4Q80XG9 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Lrrtm4Q80XG9 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lrrtm4Q80XG9 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lrrtm4Q80XG9 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lrrtm4Q80XG9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lrrtm4Q80XG9 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Lrrtm4Q80XG9 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.08■□□□□ 0.16
Lrrtm4Q80XG9 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lrrtm4Q80XG9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lrrtm4Q80XG9 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.08■□□□□ 0.16
Lrrtm4Q80XG9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Lrrtm4Q80XG9 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lrrtm4Q80XG9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lrrtm4Q80XG9 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrrtm4Q80XG9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Lrrtm4Q80XG9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrrtm4Q80XG9 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Lrrtm4Q80XG9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Lrrtm4Q80XG9 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Lrrtm4Q80XG9 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrrtm4Q80XG9 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.07■□□□□ 0.16
Lrrtm4Q80XG9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Lrrtm4Q80XG9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Lrrtm4Q80XG9 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.07■□□□□ 0.16
Lrrtm4Q80XG9 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrrtm4Q80XG9 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrrtm4Q80XG9 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrrtm4Q80XG9 Gm15794-201ENSMUST00000120182 631 ntBASIC16.07■□□□□ 0.16
Lrrtm4Q80XG9 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.07■□□□□ 0.16
Lrrtm4Q80XG9 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrrtm4Q80XG9 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrrtm4Q80XG9 Gm10819-201ENSMUST00000099988 561 ntBASIC16.07■□□□□ 0.16
Lrrtm4Q80XG9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrrtm4Q80XG9 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrrtm4Q80XG9 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Lrrtm4Q80XG9 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrrtm4Q80XG9 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lrrtm4Q80XG9 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Lrrtm4Q80XG9 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lrrtm4Q80XG9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lrrtm4Q80XG9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Lrrtm4Q80XG9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lrrtm4Q80XG9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
Lrrtm4Q80XG9 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lrrtm4Q80XG9 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms