Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Srrm3Q80WV7 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Srrm3Q80WV7 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Srrm3Q80WV7 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Srrm3Q80WV7 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Srrm3Q80WV7 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Srrm3Q80WV7 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Srrm3Q80WV7 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Srrm3Q80WV7 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Srrm3Q80WV7 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Srrm3Q80WV7 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Srrm3Q80WV7 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Srrm3Q80WV7 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Srrm3Q80WV7 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Srrm3Q80WV7 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Srrm3Q80WV7 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Srrm3Q80WV7 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Srrm3Q80WV7 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Srrm3Q80WV7 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.26■□□□□ 0.35
Srrm3Q80WV7 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Srrm3Q80WV7 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Srrm3Q80WV7 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Srrm3Q80WV7 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Srrm3Q80WV7 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Srrm3Q80WV7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Srrm3Q80WV7 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Srrm3Q80WV7 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Srrm3Q80WV7 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Srrm3Q80WV7 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Srrm3Q80WV7 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Srrm3Q80WV7 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Srrm3Q80WV7 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Srrm3Q80WV7 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Srrm3Q80WV7 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Srrm3Q80WV7 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Srrm3Q80WV7 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Srrm3Q80WV7 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Srrm3Q80WV7 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Srrm3Q80WV7 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Srrm3Q80WV7 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Srrm3Q80WV7 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Srrm3Q80WV7 Gm6659-201ENSMUST00000174752 547 ntBASIC17.25■□□□□ 0.35
Srrm3Q80WV7 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.25■□□□□ 0.35
Srrm3Q80WV7 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Srrm3Q80WV7 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Srrm3Q80WV7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Srrm3Q80WV7 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Srrm3Q80WV7 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Srrm3Q80WV7 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Srrm3Q80WV7 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Srrm3Q80WV7 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Srrm3Q80WV7 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Srrm3Q80WV7 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Srrm3Q80WV7 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Srrm3Q80WV7 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Srrm3Q80WV7 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Srrm3Q80WV7 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Srrm3Q80WV7 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Srrm3Q80WV7 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Srrm3Q80WV7 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Srrm3Q80WV7 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Srrm3Q80WV7 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.24■□□□□ 0.35
Srrm3Q80WV7 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Srrm3Q80WV7 Gm2399-201ENSMUST00000104944 225 ntBASIC17.24■□□□□ 0.35
Srrm3Q80WV7 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Srrm3Q80WV7 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.24■□□□□ 0.35
Srrm3Q80WV7 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.24■□□□□ 0.35
Srrm3Q80WV7 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Srrm3Q80WV7 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Srrm3Q80WV7 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Srrm3Q80WV7 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Srrm3Q80WV7 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Srrm3Q80WV7 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Srrm3Q80WV7 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Srrm3Q80WV7 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Srrm3Q80WV7 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Srrm3Q80WV7 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.24■□□□□ 0.35
Srrm3Q80WV7 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Srrm3Q80WV7 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.24■□□□□ 0.35
Srrm3Q80WV7 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Srrm3Q80WV7 Asic1-205ENSMUST00000228185 1818 ntBASIC17.24■□□□□ 0.35
Srrm3Q80WV7 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Srrm3Q80WV7 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Srrm3Q80WV7 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Srrm3Q80WV7 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Srrm3Q80WV7 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Srrm3Q80WV7 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Srrm3Q80WV7 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Srrm3Q80WV7 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Srrm3Q80WV7 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Srrm3Q80WV7 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.23■□□□□ 0.35
Srrm3Q80WV7 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.23■□□□□ 0.35
Srrm3Q80WV7 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Srrm3Q80WV7 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Srrm3Q80WV7 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Srrm3Q80WV7 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Srrm3Q80WV7 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Srrm3Q80WV7 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Srrm3Q80WV7 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Srrm3Q80WV7 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms