Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rpp38Q80UU2 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rpp38Q80UU2 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rpp38Q80UU2 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpp38Q80UU2 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpp38Q80UU2 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.53■□□□□ 0.24
Rpp38Q80UU2 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rpp38Q80UU2 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Rpp38Q80UU2 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rpp38Q80UU2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rpp38Q80UU2 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rpp38Q80UU2 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Rpp38Q80UU2 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rpp38Q80UU2 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.52■□□□□ 0.24
Rpp38Q80UU2 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpp38Q80UU2 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpp38Q80UU2 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.52■□□□□ 0.24
Rpp38Q80UU2 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rpp38Q80UU2 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.52■□□□□ 0.24
Rpp38Q80UU2 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpp38Q80UU2 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.52■□□□□ 0.24
Rpp38Q80UU2 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rpp38Q80UU2 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpp38Q80UU2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpp38Q80UU2 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
Rpp38Q80UU2 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rpp38Q80UU2 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rpp38Q80UU2 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Rpp38Q80UU2 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rpp38Q80UU2 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Rpp38Q80UU2 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rpp38Q80UU2 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rpp38Q80UU2 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpp38Q80UU2 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpp38Q80UU2 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.51■□□□□ 0.23
Rpp38Q80UU2 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpp38Q80UU2 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Rpp38Q80UU2 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rpp38Q80UU2 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpp38Q80UU2 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpp38Q80UU2 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpp38Q80UU2 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Rpp38Q80UU2 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpp38Q80UU2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.51■□□□□ 0.23
Rpp38Q80UU2 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpp38Q80UU2 Gm5587-201ENSMUST00000206270 674 ntBASIC16.51■□□□□ 0.23
Rpp38Q80UU2 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rpp38Q80UU2 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpp38Q80UU2 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Rpp38Q80UU2 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpp38Q80UU2 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rpp38Q80UU2 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
Rpp38Q80UU2 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpp38Q80UU2 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpp38Q80UU2 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Rpp38Q80UU2 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.51■□□□□ 0.23
Rpp38Q80UU2 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpp38Q80UU2 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rpp38Q80UU2 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpp38Q80UU2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpp38Q80UU2 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Rpp38Q80UU2 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpp38Q80UU2 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.5■□□□□ 0.23
Rpp38Q80UU2 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rpp38Q80UU2 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Rpp38Q80UU2 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rpp38Q80UU2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.5■□□□□ 0.23
Rpp38Q80UU2 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.5■□□□□ 0.23
Rpp38Q80UU2 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.5■□□□□ 0.23
Rpp38Q80UU2 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.5■□□□□ 0.23
Rpp38Q80UU2 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.5■□□□□ 0.23
Rpp38Q80UU2 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpp38Q80UU2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Rpp38Q80UU2 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpp38Q80UU2 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rpp38Q80UU2 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpp38Q80UU2 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpp38Q80UU2 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpp38Q80UU2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpp38Q80UU2 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpp38Q80UU2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.49■□□□□ 0.23
Rpp38Q80UU2 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.49■□□□□ 0.23
Rpp38Q80UU2 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rpp38Q80UU2 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpp38Q80UU2 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpp38Q80UU2 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rpp38Q80UU2 Gm13836-201ENSMUST00000121159 501 ntBASIC16.49■□□□□ 0.23
Rpp38Q80UU2 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpp38Q80UU2 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.49■□□□□ 0.23
Rpp38Q80UU2 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Rpp38Q80UU2 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpp38Q80UU2 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpp38Q80UU2 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rpp38Q80UU2 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Rpp38Q80UU2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpp38Q80UU2 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpp38Q80UU2 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpp38Q80UU2 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rpp38Q80UU2 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rpp38Q80UU2 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms