Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh19Q80TF3 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh19Q80TF3 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.23■□□□□ 0.19
Pcdh19Q80TF3 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh19Q80TF3 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Pcdh19Q80TF3 Gm15794-201ENSMUST00000120182 631 ntBASIC16.23■□□□□ 0.19
Pcdh19Q80TF3 Olfr129-201ENSMUST00000122318 993 ntBASIC16.23■□□□□ 0.19
Pcdh19Q80TF3 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.23■□□□□ 0.19
Pcdh19Q80TF3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh19Q80TF3 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh19Q80TF3 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.23■□□□□ 0.19
Pcdh19Q80TF3 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.23■□□□□ 0.19
Pcdh19Q80TF3 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh19Q80TF3 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.23■□□□□ 0.19
Pcdh19Q80TF3 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Pcdh19Q80TF3 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh19Q80TF3 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh19Q80TF3 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh19Q80TF3 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh19Q80TF3 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh19Q80TF3 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh19Q80TF3 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Pcdh19Q80TF3 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh19Q80TF3 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh19Q80TF3 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh19Q80TF3 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh19Q80TF3 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh19Q80TF3 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Pcdh19Q80TF3 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh19Q80TF3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh19Q80TF3 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh19Q80TF3 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh19Q80TF3 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh19Q80TF3 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh19Q80TF3 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh19Q80TF3 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Pcdh19Q80TF3 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh19Q80TF3 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh19Q80TF3 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh19Q80TF3 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.21■□□□□ 0.19
Pcdh19Q80TF3 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh19Q80TF3 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.21■□□□□ 0.19
Pcdh19Q80TF3 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh19Q80TF3 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.21■□□□□ 0.19
Pcdh19Q80TF3 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.21■□□□□ 0.19
Pcdh19Q80TF3 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.21■□□□□ 0.19
Pcdh19Q80TF3 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh19Q80TF3 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh19Q80TF3 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.21■□□□□ 0.19
Pcdh19Q80TF3 Gm10052-201ENSMUST00000168019 960 ntBASIC16.21■□□□□ 0.19
Pcdh19Q80TF3 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Pcdh19Q80TF3 Gm7729-201ENSMUST00000050143 801 ntBASIC16.21■□□□□ 0.19
Pcdh19Q80TF3 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh19Q80TF3 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh19Q80TF3 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh19Q80TF3 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh19Q80TF3 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh19Q80TF3 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh19Q80TF3 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh19Q80TF3 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh19Q80TF3 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh19Q80TF3 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Pcdh19Q80TF3 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Pcdh19Q80TF3 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Pcdh19Q80TF3 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.21■□□□□ 0.18
Pcdh19Q80TF3 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Pcdh19Q80TF3 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.2■□□□□ 0.18
Pcdh19Q80TF3 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh19Q80TF3 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Pcdh19Q80TF3 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh19Q80TF3 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh19Q80TF3 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh19Q80TF3 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh19Q80TF3 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh19Q80TF3 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh19Q80TF3 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh19Q80TF3 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Pcdh19Q80TF3 Gm7153-201ENSMUST00000117092 455 ntBASIC16.2■□□□□ 0.18
Pcdh19Q80TF3 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.2■□□□□ 0.18
Pcdh19Q80TF3 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.2■□□□□ 0.18
Pcdh19Q80TF3 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.2■□□□□ 0.18
Pcdh19Q80TF3 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.2■□□□□ 0.18
Pcdh19Q80TF3 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.2■□□□□ 0.18
Pcdh19Q80TF3 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh19Q80TF3 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh19Q80TF3 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh19Q80TF3 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh19Q80TF3 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh19Q80TF3 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh19Q80TF3 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh19Q80TF3 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh19Q80TF3 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh19Q80TF3 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.19■□□□□ 0.18
Pcdh19Q80TF3 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh19Q80TF3 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh19Q80TF3 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh19Q80TF3 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh19Q80TF3 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh19Q80TF3 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh19Q80TF3 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms