Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
Rpap1Q80TE0 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Rpap1Q80TE0 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Rpap1Q80TE0 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Rpap1Q80TE0 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
Rpap1Q80TE0 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Rpap1Q80TE0 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC25.57■■□□□ 1.68
Rpap1Q80TE0 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Rpap1Q80TE0 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Rpap1Q80TE0 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
Rpap1Q80TE0 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Rpap1Q80TE0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Rpap1Q80TE0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Rpap1Q80TE0 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Rpap1Q80TE0 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Rpap1Q80TE0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
Rpap1Q80TE0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
Rpap1Q80TE0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
Rpap1Q80TE0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC25.56■■□□□ 1.68
Rpap1Q80TE0 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Rpap1Q80TE0 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC25.56■■□□□ 1.68
Rpap1Q80TE0 Mir6404-201ENSMUST00000183699 94 ntBASIC25.56■■□□□ 1.68
Rpap1Q80TE0 Gm8655-201ENSMUST00000221159 852 ntBASIC25.56■■□□□ 1.68
Rpap1Q80TE0 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Rpap1Q80TE0 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC25.56■■□□□ 1.68
Rpap1Q80TE0 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC25.56■■□□□ 1.68
Rpap1Q80TE0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Rpap1Q80TE0 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC25.56■■□□□ 1.68
Rpap1Q80TE0 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Rpap1Q80TE0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Rpap1Q80TE0 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Rpap1Q80TE0 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Rpap1Q80TE0 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Rpap1Q80TE0 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Rpap1Q80TE0 Gm44832-201ENSMUST00000208849 2303 ntBASIC25.55■■□□□ 1.68
Rpap1Q80TE0 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Rpap1Q80TE0 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Rpap1Q80TE0 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Rpap1Q80TE0 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Rpap1Q80TE0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Rpap1Q80TE0 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Rpap1Q80TE0 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Rpap1Q80TE0 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Rpap1Q80TE0 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Rpap1Q80TE0 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC25.54■■□□□ 1.68
Rpap1Q80TE0 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Rpap1Q80TE0 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Rpap1Q80TE0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Rpap1Q80TE0 Ddx41-204ENSMUST00000224765 2199 ntBASIC25.54■■□□□ 1.68
Rpap1Q80TE0 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Rpap1Q80TE0 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC25.54■■□□□ 1.68
Rpap1Q80TE0 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC25.54■■□□□ 1.68
Rpap1Q80TE0 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC25.54■■□□□ 1.68
Rpap1Q80TE0 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC25.54■■□□□ 1.68
Rpap1Q80TE0 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Rpap1Q80TE0 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC25.54■■□□□ 1.68
Rpap1Q80TE0 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Rpap1Q80TE0 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
Rpap1Q80TE0 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
Rpap1Q80TE0 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Rpap1Q80TE0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Rpap1Q80TE0 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Rpap1Q80TE0 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Rpap1Q80TE0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Rpap1Q80TE0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Rpap1Q80TE0 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC25.53■■□□□ 1.68
Rpap1Q80TE0 Gm26308-201ENSMUST00000157768 69 ntBASIC25.53■■□□□ 1.68
Rpap1Q80TE0 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC25.53■■□□□ 1.68
Rpap1Q80TE0 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Rpap1Q80TE0 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC25.53■■□□□ 1.68
Rpap1Q80TE0 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Rpap1Q80TE0 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC25.53■■□□□ 1.68
Rpap1Q80TE0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Rpap1Q80TE0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Rpap1Q80TE0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Rpap1Q80TE0 Gm37519-201ENSMUST00000191687 2210 ntBASIC25.52■■□□□ 1.68
Rpap1Q80TE0 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Rpap1Q80TE0 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Rpap1Q80TE0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
Rpap1Q80TE0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Rpap1Q80TE0 H2af-ps-201ENSMUST00000119066 295 ntBASIC25.52■■□□□ 1.68
Rpap1Q80TE0 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Rpap1Q80TE0 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Rpap1Q80TE0 Zcchc6-207ENSMUST00000225576 2499 ntBASIC25.52■■□□□ 1.68
Rpap1Q80TE0 Gm37194-201ENSMUST00000193092 3031 ntBASIC25.52■■□□□ 1.68
Rpap1Q80TE0 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Rpap1Q80TE0 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
Rpap1Q80TE0 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Rpap1Q80TE0 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Rpap1Q80TE0 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
Rpap1Q80TE0 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC25.51■■□□□ 1.67
Rpap1Q80TE0 Mir3113-201ENSMUST00000175478 76 ntBASIC25.51■■□□□ 1.67
Rpap1Q80TE0 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Rpap1Q80TE0 AC159106.1-201ENSMUST00000224421 690 ntBASIC25.51■■□□□ 1.67
Rpap1Q80TE0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Rpap1Q80TE0 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Rpap1Q80TE0 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC25.51■■□□□ 1.67
Rpap1Q80TE0 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
Rpap1Q80TE0 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Rpap1Q80TE0 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms