Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Prpf38bQ80SY5 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.25■□□□□ 0.35
Prpf38bQ80SY5 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.25■□□□□ 0.35
Prpf38bQ80SY5 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf38bQ80SY5 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.25■□□□□ 0.35
Prpf38bQ80SY5 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.25■□□□□ 0.35
Prpf38bQ80SY5 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.25■□□□□ 0.35
Prpf38bQ80SY5 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf38bQ80SY5 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.25■□□□□ 0.35
Prpf38bQ80SY5 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf38bQ80SY5 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf38bQ80SY5 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf38bQ80SY5 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf38bQ80SY5 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf38bQ80SY5 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.25■□□□□ 0.35
Prpf38bQ80SY5 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf38bQ80SY5 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf38bQ80SY5 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf38bQ80SY5 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf38bQ80SY5 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf38bQ80SY5 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Prpf38bQ80SY5 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf38bQ80SY5 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf38bQ80SY5 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf38bQ80SY5 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Prpf38bQ80SY5 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf38bQ80SY5 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf38bQ80SY5 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.24■□□□□ 0.35
Prpf38bQ80SY5 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Prpf38bQ80SY5 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.24■□□□□ 0.35
Prpf38bQ80SY5 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf38bQ80SY5 Gm6736-201ENSMUST00000166583 948 ntBASIC17.24■□□□□ 0.35
Prpf38bQ80SY5 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.24■□□□□ 0.35
Prpf38bQ80SY5 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.24■□□□□ 0.35
Prpf38bQ80SY5 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf38bQ80SY5 Rps4l-201ENSMUST00000071745 943 ntBASIC17.24■□□□□ 0.35
Prpf38bQ80SY5 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf38bQ80SY5 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf38bQ80SY5 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf38bQ80SY5 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf38bQ80SY5 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf38bQ80SY5 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Prpf38bQ80SY5 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf38bQ80SY5 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf38bQ80SY5 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.23■□□□□ 0.35
Prpf38bQ80SY5 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf38bQ80SY5 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf38bQ80SY5 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf38bQ80SY5 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf38bQ80SY5 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf38bQ80SY5 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.23■□□□□ 0.35
Prpf38bQ80SY5 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Prpf38bQ80SY5 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.23■□□□□ 0.35
Prpf38bQ80SY5 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.23■□□□□ 0.35
Prpf38bQ80SY5 Gm9731-201ENSMUST00000209480 747 ntBASIC17.23■□□□□ 0.35
Prpf38bQ80SY5 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf38bQ80SY5 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf38bQ80SY5 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf38bQ80SY5 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Prpf38bQ80SY5 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf38bQ80SY5 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Prpf38bQ80SY5 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf38bQ80SY5 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf38bQ80SY5 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Prpf38bQ80SY5 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf38bQ80SY5 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf38bQ80SY5 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.22■□□□□ 0.35
Prpf38bQ80SY5 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
Prpf38bQ80SY5 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf38bQ80SY5 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf38bQ80SY5 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC17.22■□□□□ 0.35
Prpf38bQ80SY5 Gm2756-201ENSMUST00000195851 400 ntBASIC17.22■□□□□ 0.35
Prpf38bQ80SY5 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.22■□□□□ 0.35
Prpf38bQ80SY5 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.22■□□□□ 0.35
Prpf38bQ80SY5 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.22■□□□□ 0.35
Prpf38bQ80SY5 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf38bQ80SY5 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Prpf38bQ80SY5 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf38bQ80SY5 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf38bQ80SY5 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Prpf38bQ80SY5 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf38bQ80SY5 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Prpf38bQ80SY5 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf38bQ80SY5 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Prpf38bQ80SY5 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf38bQ80SY5 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf38bQ80SY5 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf38bQ80SY5 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf38bQ80SY5 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf38bQ80SY5 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf38bQ80SY5 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf38bQ80SY5 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Prpf38bQ80SY5 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf38bQ80SY5 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Prpf38bQ80SY5 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Prpf38bQ80SY5 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.21■□□□□ 0.35
Prpf38bQ80SY5 Gm11594-201ENSMUST00000122313 162 ntBASIC17.21■□□□□ 0.35
Prpf38bQ80SY5 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf38bQ80SY5 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf38bQ80SY5 Gm27702-201ENSMUST00000184512 56 ntBASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms