Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh8Q7TSK3 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdh8Q7TSK3 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdh8Q7TSK3 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Pcdh8Q7TSK3 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdh8Q7TSK3 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Pcdh8Q7TSK3 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh8Q7TSK3 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.33■□□□□ 0.2
Pcdh8Q7TSK3 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh8Q7TSK3 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh8Q7TSK3 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh8Q7TSK3 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Pcdh8Q7TSK3 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh8Q7TSK3 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh8Q7TSK3 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.33■□□□□ 0.2
Pcdh8Q7TSK3 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh8Q7TSK3 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh8Q7TSK3 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.33■□□□□ 0.2
Pcdh8Q7TSK3 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh8Q7TSK3 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh8Q7TSK3 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh8Q7TSK3 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh8Q7TSK3 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Pcdh8Q7TSK3 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh8Q7TSK3 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh8Q7TSK3 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh8Q7TSK3 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh8Q7TSK3 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh8Q7TSK3 Gm27357-201ENSMUST00000183754 135 ntBASIC16.32■□□□□ 0.2
Pcdh8Q7TSK3 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh8Q7TSK3 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Pcdh8Q7TSK3 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh8Q7TSK3 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh8Q7TSK3 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh8Q7TSK3 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh8Q7TSK3 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh8Q7TSK3 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh8Q7TSK3 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh8Q7TSK3 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Pcdh8Q7TSK3 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh8Q7TSK3 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh8Q7TSK3 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.31■□□□□ 0.2
Pcdh8Q7TSK3 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh8Q7TSK3 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh8Q7TSK3 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdh8Q7TSK3 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdh8Q7TSK3 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh8Q7TSK3 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh8Q7TSK3 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh8Q7TSK3 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.31■□□□□ 0.2
Pcdh8Q7TSK3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh8Q7TSK3 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.31■□□□□ 0.2
Pcdh8Q7TSK3 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdh8Q7TSK3 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Pcdh8Q7TSK3 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh8Q7TSK3 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh8Q7TSK3 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh8Q7TSK3 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Pcdh8Q7TSK3 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh8Q7TSK3 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh8Q7TSK3 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh8Q7TSK3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh8Q7TSK3 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.31■□□□□ 0.2
Pcdh8Q7TSK3 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Pcdh8Q7TSK3 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh8Q7TSK3 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh8Q7TSK3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh8Q7TSK3 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh8Q7TSK3 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh8Q7TSK3 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh8Q7TSK3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh8Q7TSK3 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh8Q7TSK3 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Pcdh8Q7TSK3 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pcdh8Q7TSK3 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.3■□□□□ 0.2
Pcdh8Q7TSK3 Gm7153-201ENSMUST00000117092 455 ntBASIC16.3■□□□□ 0.2
Pcdh8Q7TSK3 Olfr129-201ENSMUST00000122318 993 ntBASIC16.3■□□□□ 0.2
Pcdh8Q7TSK3 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.3■□□□□ 0.2
Pcdh8Q7TSK3 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.3■□□□□ 0.2
Pcdh8Q7TSK3 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.3■□□□□ 0.2
Pcdh8Q7TSK3 Gm18115-201ENSMUST00000221209 621 ntBASIC16.3■□□□□ 0.2
Pcdh8Q7TSK3 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh8Q7TSK3 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Pcdh8Q7TSK3 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh8Q7TSK3 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.3■□□□□ 0.2
Pcdh8Q7TSK3 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh8Q7TSK3 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.3■□□□□ 0.2
Pcdh8Q7TSK3 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh8Q7TSK3 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh8Q7TSK3 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Pcdh8Q7TSK3 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh8Q7TSK3 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh8Q7TSK3 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh8Q7TSK3 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh8Q7TSK3 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh8Q7TSK3 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh8Q7TSK3 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh8Q7TSK3 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh8Q7TSK3 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh8Q7TSK3 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms