Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3d21Q7TSG5 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sh3d21Q7TSG5 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sh3d21Q7TSG5 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sh3d21Q7TSG5 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sh3d21Q7TSG5 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sh3d21Q7TSG5 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Sh3d21Q7TSG5 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC18.11■□□□□ 0.49
Sh3d21Q7TSG5 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.11■□□□□ 0.49
Sh3d21Q7TSG5 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.11■□□□□ 0.49
Sh3d21Q7TSG5 Gm10566-201ENSMUST00000086739 996 ntBASIC18.11■□□□□ 0.49
Sh3d21Q7TSG5 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Sh3d21Q7TSG5 Actl10-202ENSMUST00000226583 1501 ntBASIC18.11■□□□□ 0.49
Sh3d21Q7TSG5 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sh3d21Q7TSG5 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sh3d21Q7TSG5 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sh3d21Q7TSG5 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Sh3d21Q7TSG5 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sh3d21Q7TSG5 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sh3d21Q7TSG5 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.11■□□□□ 0.49
Sh3d21Q7TSG5 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sh3d21Q7TSG5 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3d21Q7TSG5 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3d21Q7TSG5 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3d21Q7TSG5 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3d21Q7TSG5 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3d21Q7TSG5 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3d21Q7TSG5 Phf7-203ENSMUST00000226565 1971 ntBASIC18.1■□□□□ 0.49
Sh3d21Q7TSG5 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3d21Q7TSG5 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.1■□□□□ 0.49
Sh3d21Q7TSG5 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Sh3d21Q7TSG5 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3d21Q7TSG5 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Sh3d21Q7TSG5 Gm13186-201ENSMUST00000118031 316 ntBASIC18.1■□□□□ 0.49
Sh3d21Q7TSG5 Mir1668-201ENSMUST00000184114 107 ntBASIC18.1■□□□□ 0.49
Sh3d21Q7TSG5 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.1■□□□□ 0.49
Sh3d21Q7TSG5 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Sh3d21Q7TSG5 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Sh3d21Q7TSG5 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3d21Q7TSG5 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.1■□□□□ 0.49
Sh3d21Q7TSG5 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3d21Q7TSG5 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3d21Q7TSG5 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3d21Q7TSG5 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3d21Q7TSG5 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.1■□□□□ 0.49
Sh3d21Q7TSG5 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3d21Q7TSG5 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.09■□□□□ 0.49
Sh3d21Q7TSG5 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3d21Q7TSG5 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3d21Q7TSG5 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3d21Q7TSG5 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.09■□□□□ 0.49
Sh3d21Q7TSG5 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3d21Q7TSG5 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3d21Q7TSG5 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3d21Q7TSG5 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3d21Q7TSG5 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3d21Q7TSG5 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Sh3d21Q7TSG5 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Sh3d21Q7TSG5 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Sh3d21Q7TSG5 Gm13216-201ENSMUST00000117145 591 ntBASIC18.09■□□□□ 0.49
Sh3d21Q7TSG5 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.09■□□□□ 0.49
Sh3d21Q7TSG5 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3d21Q7TSG5 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Sh3d21Q7TSG5 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Sh3d21Q7TSG5 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.09■□□□□ 0.49
Sh3d21Q7TSG5 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3d21Q7TSG5 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3d21Q7TSG5 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3d21Q7TSG5 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3d21Q7TSG5 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3d21Q7TSG5 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sh3d21Q7TSG5 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sh3d21Q7TSG5 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sh3d21Q7TSG5 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sh3d21Q7TSG5 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3d21Q7TSG5 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.08■□□□□ 0.48
Sh3d21Q7TSG5 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3d21Q7TSG5 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.08■□□□□ 0.48
Sh3d21Q7TSG5 Gm18101-201ENSMUST00000215769 548 ntBASIC18.08■□□□□ 0.48
Sh3d21Q7TSG5 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3d21Q7TSG5 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Sh3d21Q7TSG5 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3d21Q7TSG5 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Sh3d21Q7TSG5 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Sh3d21Q7TSG5 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3d21Q7TSG5 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3d21Q7TSG5 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3d21Q7TSG5 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Sh3d21Q7TSG5 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.07■□□□□ 0.48
Sh3d21Q7TSG5 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3d21Q7TSG5 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
Sh3d21Q7TSG5 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3d21Q7TSG5 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3d21Q7TSG5 Gm22697-201ENSMUST00000175194 63 ntBASIC18.07■□□□□ 0.48
Sh3d21Q7TSG5 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.07■□□□□ 0.48
Sh3d21Q7TSG5 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.07■□□□□ 0.48
Sh3d21Q7TSG5 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Sh3d21Q7TSG5 Gm27389-201ENSMUST00000183622 195 ntBASIC18.07■□□□□ 0.48
Sh3d21Q7TSG5 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Sh3d21Q7TSG5 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms