Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Otub1Q7TQI3 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Otub1Q7TQI3 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Otub1Q7TQI3 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Otub1Q7TQI3 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Otub1Q7TQI3 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Otub1Q7TQI3 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Otub1Q7TQI3 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Otub1Q7TQI3 Gm5297-201ENSMUST00000198555 1171 ntBASIC15.75■□□□□ 0.11
Otub1Q7TQI3 Gm7791-201ENSMUST00000219066 539 ntBASIC15.75■□□□□ 0.11
Otub1Q7TQI3 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Otub1Q7TQI3 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Otub1Q7TQI3 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Otub1Q7TQI3 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Otub1Q7TQI3 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Otub1Q7TQI3 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Otub1Q7TQI3 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Otub1Q7TQI3 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Otub1Q7TQI3 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Otub1Q7TQI3 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Otub1Q7TQI3 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Otub1Q7TQI3 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Otub1Q7TQI3 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Otub1Q7TQI3 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Otub1Q7TQI3 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Otub1Q7TQI3 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Otub1Q7TQI3 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Otub1Q7TQI3 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Otub1Q7TQI3 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.74■□□□□ 0.11
Otub1Q7TQI3 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.74■□□□□ 0.11
Otub1Q7TQI3 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.74■□□□□ 0.11
Otub1Q7TQI3 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Otub1Q7TQI3 Gm3375-201ENSMUST00000203929 796 ntBASIC15.74■□□□□ 0.11
Otub1Q7TQI3 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC15.74■□□□□ 0.11
Otub1Q7TQI3 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.74■□□□□ 0.11
Otub1Q7TQI3 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Otub1Q7TQI3 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Otub1Q7TQI3 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Otub1Q7TQI3 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Otub1Q7TQI3 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Otub1Q7TQI3 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Otub1Q7TQI3 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Otub1Q7TQI3 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Otub1Q7TQI3 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Otub1Q7TQI3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Otub1Q7TQI3 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Otub1Q7TQI3 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
Otub1Q7TQI3 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Otub1Q7TQI3 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Otub1Q7TQI3 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Otub1Q7TQI3 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Otub1Q7TQI3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Otub1Q7TQI3 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Otub1Q7TQI3 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Otub1Q7TQI3 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Otub1Q7TQI3 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Otub1Q7TQI3 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.73■□□□□ 0.11
Otub1Q7TQI3 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Otub1Q7TQI3 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Otub1Q7TQI3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.73■□□□□ 0.11
Otub1Q7TQI3 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Otub1Q7TQI3 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.73■□□□□ 0.11
Otub1Q7TQI3 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.73■□□□□ 0.11
Otub1Q7TQI3 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.73■□□□□ 0.11
Otub1Q7TQI3 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Otub1Q7TQI3 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Otub1Q7TQI3 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Otub1Q7TQI3 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Otub1Q7TQI3 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Otub1Q7TQI3 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.73■□□□□ 0.11
Otub1Q7TQI3 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Otub1Q7TQI3 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Otub1Q7TQI3 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Otub1Q7TQI3 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Otub1Q7TQI3 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Otub1Q7TQI3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Otub1Q7TQI3 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.73■□□□□ 0.11
Otub1Q7TQI3 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Otub1Q7TQI3 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Otub1Q7TQI3 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Otub1Q7TQI3 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Otub1Q7TQI3 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Otub1Q7TQI3 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.72■□□□□ 0.11
Otub1Q7TQI3 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Otub1Q7TQI3 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Otub1Q7TQI3 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Otub1Q7TQI3 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Otub1Q7TQI3 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Otub1Q7TQI3 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Otub1Q7TQI3 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Otub1Q7TQI3 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Otub1Q7TQI3 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Otub1Q7TQI3 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Otub1Q7TQI3 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Otub1Q7TQI3 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Otub1Q7TQI3 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.72■□□□□ 0.11
Otub1Q7TQI3 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Otub1Q7TQI3 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Otub1Q7TQI3 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Otub1Q7TQI3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms