Protein–RNA interactions for Protein: Q6Q473

Clca4a, Calcium-activated chloride channel regulator 4A, mousemouse

Predictions only

Length 924 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca4aQ6Q473 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clca4aQ6Q473 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Clca4aQ6Q473 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Clca4aQ6Q473 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.72■□□□□ 0.59
Clca4aQ6Q473 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clca4aQ6Q473 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Clca4aQ6Q473 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Clca4aQ6Q473 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clca4aQ6Q473 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clca4aQ6Q473 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clca4aQ6Q473 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clca4aQ6Q473 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clca4aQ6Q473 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Clca4aQ6Q473 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clca4aQ6Q473 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Clca4aQ6Q473 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clca4aQ6Q473 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clca4aQ6Q473 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clca4aQ6Q473 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clca4aQ6Q473 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Clca4aQ6Q473 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clca4aQ6Q473 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clca4aQ6Q473 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clca4aQ6Q473 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Clca4aQ6Q473 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Clca4aQ6Q473 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clca4aQ6Q473 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Clca4aQ6Q473 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Clca4aQ6Q473 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clca4aQ6Q473 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Clca4aQ6Q473 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Clca4aQ6Q473 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clca4aQ6Q473 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clca4aQ6Q473 Gm15372-201ENSMUST00000120729 834 ntBASIC18.7■□□□□ 0.58
Clca4aQ6Q473 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Clca4aQ6Q473 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Clca4aQ6Q473 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Clca4aQ6Q473 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.7■□□□□ 0.58
Clca4aQ6Q473 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clca4aQ6Q473 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.7■□□□□ 0.58
Clca4aQ6Q473 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.7■□□□□ 0.58
Clca4aQ6Q473 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clca4aQ6Q473 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Clca4aQ6Q473 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clca4aQ6Q473 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clca4aQ6Q473 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clca4aQ6Q473 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clca4aQ6Q473 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clca4aQ6Q473 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clca4aQ6Q473 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clca4aQ6Q473 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clca4aQ6Q473 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Clca4aQ6Q473 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clca4aQ6Q473 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clca4aQ6Q473 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clca4aQ6Q473 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Clca4aQ6Q473 Gm24589-201ENSMUST00000116692 94 ntBASIC18.69■□□□□ 0.58
Clca4aQ6Q473 Gm7153-201ENSMUST00000117092 455 ntBASIC18.69■□□□□ 0.58
Clca4aQ6Q473 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Clca4aQ6Q473 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clca4aQ6Q473 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
Clca4aQ6Q473 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clca4aQ6Q473 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Clca4aQ6Q473 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clca4aQ6Q473 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clca4aQ6Q473 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Clca4aQ6Q473 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clca4aQ6Q473 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.69■□□□□ 0.58
Clca4aQ6Q473 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clca4aQ6Q473 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clca4aQ6Q473 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Clca4aQ6Q473 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clca4aQ6Q473 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clca4aQ6Q473 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Clca4aQ6Q473 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Clca4aQ6Q473 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clca4aQ6Q473 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clca4aQ6Q473 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Clca4aQ6Q473 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clca4aQ6Q473 Birc2-201ENSMUST00000054878 378 ntBASIC18.68■□□□□ 0.58
Clca4aQ6Q473 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clca4aQ6Q473 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clca4aQ6Q473 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Clca4aQ6Q473 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clca4aQ6Q473 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clca4aQ6Q473 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clca4aQ6Q473 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Clca4aQ6Q473 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clca4aQ6Q473 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clca4aQ6Q473 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clca4aQ6Q473 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clca4aQ6Q473 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clca4aQ6Q473 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Clca4aQ6Q473 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clca4aQ6Q473 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clca4aQ6Q473 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clca4aQ6Q473 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clca4aQ6Q473 Rprl3-201ENSMUST00000157400 290 ntBASIC18.67■□□□□ 0.58
Clca4aQ6Q473 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Clca4aQ6Q473 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms