Protein–RNA interactions for Protein: Q6PIJ4

Nfrkb, Nuclear factor related to kappa-B-binding protein, mousemouse

Known RBP Predictions only

Length 1,296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfrkbQ6PIJ4 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NfrkbQ6PIJ4 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
NfrkbQ6PIJ4 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NfrkbQ6PIJ4 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
NfrkbQ6PIJ4 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.63■□□□□ 0.57
NfrkbQ6PIJ4 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NfrkbQ6PIJ4 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NfrkbQ6PIJ4 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NfrkbQ6PIJ4 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NfrkbQ6PIJ4 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.63■□□□□ 0.57
NfrkbQ6PIJ4 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NfrkbQ6PIJ4 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.63■□□□□ 0.57
NfrkbQ6PIJ4 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
NfrkbQ6PIJ4 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NfrkbQ6PIJ4 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NfrkbQ6PIJ4 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NfrkbQ6PIJ4 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
NfrkbQ6PIJ4 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NfrkbQ6PIJ4 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
NfrkbQ6PIJ4 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NfrkbQ6PIJ4 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NfrkbQ6PIJ4 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NfrkbQ6PIJ4 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NfrkbQ6PIJ4 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NfrkbQ6PIJ4 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NfrkbQ6PIJ4 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NfrkbQ6PIJ4 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.62■□□□□ 0.57
NfrkbQ6PIJ4 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.62■□□□□ 0.57
NfrkbQ6PIJ4 Gm18195-201ENSMUST00000207604 706 ntBASIC18.62■□□□□ 0.57
NfrkbQ6PIJ4 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.62■□□□□ 0.57
NfrkbQ6PIJ4 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
NfrkbQ6PIJ4 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NfrkbQ6PIJ4 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
NfrkbQ6PIJ4 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NfrkbQ6PIJ4 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NfrkbQ6PIJ4 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NfrkbQ6PIJ4 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NfrkbQ6PIJ4 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NfrkbQ6PIJ4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NfrkbQ6PIJ4 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
NfrkbQ6PIJ4 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.61■□□□□ 0.57
NfrkbQ6PIJ4 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NfrkbQ6PIJ4 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NfrkbQ6PIJ4 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NfrkbQ6PIJ4 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.61■□□□□ 0.57
NfrkbQ6PIJ4 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
NfrkbQ6PIJ4 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
NfrkbQ6PIJ4 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NfrkbQ6PIJ4 Gm13312-201ENSMUST00000119631 718 ntBASIC18.61■□□□□ 0.57
NfrkbQ6PIJ4 Gm11452-201ENSMUST00000122376 690 ntBASIC18.61■□□□□ 0.57
NfrkbQ6PIJ4 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.61■□□□□ 0.57
NfrkbQ6PIJ4 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.61■□□□□ 0.57
NfrkbQ6PIJ4 Rprl3-201ENSMUST00000157400 290 ntBASIC18.61■□□□□ 0.57
NfrkbQ6PIJ4 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.61■□□□□ 0.57
NfrkbQ6PIJ4 Gm18733-201ENSMUST00000173950 856 ntBASIC18.61■□□□□ 0.57
NfrkbQ6PIJ4 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.61■□□□□ 0.57
NfrkbQ6PIJ4 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NfrkbQ6PIJ4 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.61■□□□□ 0.57
NfrkbQ6PIJ4 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NfrkbQ6PIJ4 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NfrkbQ6PIJ4 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NfrkbQ6PIJ4 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NfrkbQ6PIJ4 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NfrkbQ6PIJ4 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NfrkbQ6PIJ4 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
NfrkbQ6PIJ4 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NfrkbQ6PIJ4 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18.6■□□□□ 0.57
NfrkbQ6PIJ4 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NfrkbQ6PIJ4 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NfrkbQ6PIJ4 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
NfrkbQ6PIJ4 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.6■□□□□ 0.57
NfrkbQ6PIJ4 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
NfrkbQ6PIJ4 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NfrkbQ6PIJ4 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.6■□□□□ 0.57
NfrkbQ6PIJ4 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.6■□□□□ 0.57
NfrkbQ6PIJ4 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NfrkbQ6PIJ4 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
NfrkbQ6PIJ4 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NfrkbQ6PIJ4 AW822252-206ENSMUST00000208904 237 ntBASIC18.6■□□□□ 0.57
NfrkbQ6PIJ4 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NfrkbQ6PIJ4 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
NfrkbQ6PIJ4 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NfrkbQ6PIJ4 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
NfrkbQ6PIJ4 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NfrkbQ6PIJ4 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NfrkbQ6PIJ4 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NfrkbQ6PIJ4 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NfrkbQ6PIJ4 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.6■□□□□ 0.57
NfrkbQ6PIJ4 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
NfrkbQ6PIJ4 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NfrkbQ6PIJ4 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.59■□□□□ 0.57
NfrkbQ6PIJ4 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NfrkbQ6PIJ4 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NfrkbQ6PIJ4 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.59■□□□□ 0.57
NfrkbQ6PIJ4 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NfrkbQ6PIJ4 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
NfrkbQ6PIJ4 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NfrkbQ6PIJ4 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NfrkbQ6PIJ4 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NfrkbQ6PIJ4 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms