Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nup98Q6PFD9 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nup98Q6PFD9 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nup98Q6PFD9 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nup98Q6PFD9 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Nup98Q6PFD9 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nup98Q6PFD9 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Nup98Q6PFD9 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC19.41■□□□□ 0.7
Nup98Q6PFD9 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nup98Q6PFD9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nup98Q6PFD9 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nup98Q6PFD9 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nup98Q6PFD9 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nup98Q6PFD9 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Nup98Q6PFD9 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nup98Q6PFD9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nup98Q6PFD9 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nup98Q6PFD9 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nup98Q6PFD9 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nup98Q6PFD9 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nup98Q6PFD9 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nup98Q6PFD9 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nup98Q6PFD9 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nup98Q6PFD9 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nup98Q6PFD9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nup98Q6PFD9 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nup98Q6PFD9 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.4■□□□□ 0.7
Nup98Q6PFD9 Gm11779-201ENSMUST00000118541 368 ntBASIC19.4■□□□□ 0.7
Nup98Q6PFD9 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC19.4■□□□□ 0.7
Nup98Q6PFD9 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC19.4■□□□□ 0.7
Nup98Q6PFD9 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nup98Q6PFD9 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nup98Q6PFD9 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC19.4■□□□□ 0.7
Nup98Q6PFD9 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nup98Q6PFD9 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC19.4■□□□□ 0.7
Nup98Q6PFD9 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nup98Q6PFD9 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nup98Q6PFD9 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nup98Q6PFD9 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nup98Q6PFD9 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nup98Q6PFD9 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nup98Q6PFD9 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Nup98Q6PFD9 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC19.39■□□□□ 0.7
Nup98Q6PFD9 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC19.39■□□□□ 0.7
Nup98Q6PFD9 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
Nup98Q6PFD9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.39■□□□□ 0.7
Nup98Q6PFD9 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nup98Q6PFD9 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Nup98Q6PFD9 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nup98Q6PFD9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nup98Q6PFD9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nup98Q6PFD9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Nup98Q6PFD9 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nup98Q6PFD9 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nup98Q6PFD9 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nup98Q6PFD9 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nup98Q6PFD9 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nup98Q6PFD9 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nup98Q6PFD9 Gm5682-201ENSMUST00000173402 505 ntBASIC19.39■□□□□ 0.69
Nup98Q6PFD9 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nup98Q6PFD9 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nup98Q6PFD9 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nup98Q6PFD9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nup98Q6PFD9 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nup98Q6PFD9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Nup98Q6PFD9 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Nup98Q6PFD9 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nup98Q6PFD9 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nup98Q6PFD9 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC19.38■□□□□ 0.69
Nup98Q6PFD9 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nup98Q6PFD9 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nup98Q6PFD9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.38■□□□□ 0.69
Nup98Q6PFD9 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Nup98Q6PFD9 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.38■□□□□ 0.69
Nup98Q6PFD9 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nup98Q6PFD9 Gm5364-201ENSMUST00000216789 889 ntBASIC19.38■□□□□ 0.69
Nup98Q6PFD9 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nup98Q6PFD9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Nup98Q6PFD9 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nup98Q6PFD9 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nup98Q6PFD9 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nup98Q6PFD9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nup98Q6PFD9 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nup98Q6PFD9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nup98Q6PFD9 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nup98Q6PFD9 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nup98Q6PFD9 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Nup98Q6PFD9 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nup98Q6PFD9 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC19.37■□□□□ 0.69
Nup98Q6PFD9 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nup98Q6PFD9 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nup98Q6PFD9 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nup98Q6PFD9 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
Nup98Q6PFD9 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nup98Q6PFD9 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nup98Q6PFD9 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nup98Q6PFD9 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nup98Q6PFD9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nup98Q6PFD9 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nup98Q6PFD9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms