Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcc2Q6PDG5 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Smarcc2Q6PDG5 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcc2Q6PDG5 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Smarcc2Q6PDG5 Gm21559-201ENSMUST00000220638 855 ntBASIC19.3■□□□□ 0.68
Smarcc2Q6PDG5 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcc2Q6PDG5 Gm8587-201ENSMUST00000076538 843 ntBASIC19.3■□□□□ 0.68
Smarcc2Q6PDG5 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcc2Q6PDG5 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcc2Q6PDG5 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
Smarcc2Q6PDG5 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcc2Q6PDG5 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.3■□□□□ 0.68
Smarcc2Q6PDG5 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcc2Q6PDG5 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Smarcc2Q6PDG5 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcc2Q6PDG5 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Smarcc2Q6PDG5 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcc2Q6PDG5 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.29■□□□□ 0.68
Smarcc2Q6PDG5 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Smarcc2Q6PDG5 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcc2Q6PDG5 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcc2Q6PDG5 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcc2Q6PDG5 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Smarcc2Q6PDG5 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcc2Q6PDG5 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcc2Q6PDG5 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcc2Q6PDG5 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Smarcc2Q6PDG5 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.29■□□□□ 0.68
Smarcc2Q6PDG5 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.29■□□□□ 0.68
Smarcc2Q6PDG5 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcc2Q6PDG5 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcc2Q6PDG5 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Smarcc2Q6PDG5 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Smarcc2Q6PDG5 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.29■□□□□ 0.68
Smarcc2Q6PDG5 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Smarcc2Q6PDG5 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcc2Q6PDG5 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Smarcc2Q6PDG5 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.29■□□□□ 0.68
Smarcc2Q6PDG5 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcc2Q6PDG5 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcc2Q6PDG5 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcc2Q6PDG5 Phf7-203ENSMUST00000226565 1971 ntBASIC19.28■□□□□ 0.68
Smarcc2Q6PDG5 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcc2Q6PDG5 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Smarcc2Q6PDG5 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Smarcc2Q6PDG5 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Smarcc2Q6PDG5 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.28■□□□□ 0.68
Smarcc2Q6PDG5 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.28■□□□□ 0.68
Smarcc2Q6PDG5 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcc2Q6PDG5 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.28■□□□□ 0.68
Smarcc2Q6PDG5 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcc2Q6PDG5 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcc2Q6PDG5 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.28■□□□□ 0.68
Smarcc2Q6PDG5 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcc2Q6PDG5 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcc2Q6PDG5 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcc2Q6PDG5 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcc2Q6PDG5 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcc2Q6PDG5 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcc2Q6PDG5 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcc2Q6PDG5 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Smarcc2Q6PDG5 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcc2Q6PDG5 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Smarcc2Q6PDG5 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.27■□□□□ 0.68
Smarcc2Q6PDG5 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Smarcc2Q6PDG5 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarcc2Q6PDG5 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarcc2Q6PDG5 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarcc2Q6PDG5 AA414768-201ENSMUST00000121924 1257 ntBASIC19.27■□□□□ 0.68
Smarcc2Q6PDG5 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.27■□□□□ 0.68
Smarcc2Q6PDG5 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Smarcc2Q6PDG5 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Smarcc2Q6PDG5 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Smarcc2Q6PDG5 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarcc2Q6PDG5 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Smarcc2Q6PDG5 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcc2Q6PDG5 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Smarcc2Q6PDG5 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcc2Q6PDG5 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcc2Q6PDG5 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Smarcc2Q6PDG5 Actl10-202ENSMUST00000226583 1501 ntBASIC19.26■□□□□ 0.67
Smarcc2Q6PDG5 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.26■□□□□ 0.67
Smarcc2Q6PDG5 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcc2Q6PDG5 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.26■□□□□ 0.67
Smarcc2Q6PDG5 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcc2Q6PDG5 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcc2Q6PDG5 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.26■□□□□ 0.67
Smarcc2Q6PDG5 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.26■□□□□ 0.67
Smarcc2Q6PDG5 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcc2Q6PDG5 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcc2Q6PDG5 Gm10566-201ENSMUST00000086739 996 ntBASIC19.26■□□□□ 0.67
Smarcc2Q6PDG5 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcc2Q6PDG5 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcc2Q6PDG5 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Smarcc2Q6PDG5 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcc2Q6PDG5 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcc2Q6PDG5 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcc2Q6PDG5 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcc2Q6PDG5 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcc2Q6PDG5 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms