Protein–RNA interactions for Protein: Q6PCX9

Trim37, E3 ubiquitin-protein ligase TRIM37, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim37Q6PCX9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim37Q6PCX9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Trim37Q6PCX9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.34■□□□□ 0.53
Trim37Q6PCX9 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim37Q6PCX9 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim37Q6PCX9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Trim37Q6PCX9 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.34■□□□□ 0.53
Trim37Q6PCX9 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Trim37Q6PCX9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.34■□□□□ 0.53
Trim37Q6PCX9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim37Q6PCX9 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim37Q6PCX9 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim37Q6PCX9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim37Q6PCX9 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim37Q6PCX9 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim37Q6PCX9 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Trim37Q6PCX9 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trim37Q6PCX9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim37Q6PCX9 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Trim37Q6PCX9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim37Q6PCX9 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Trim37Q6PCX9 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim37Q6PCX9 Gm15794-201ENSMUST00000120182 631 ntBASIC18.33■□□□□ 0.52
Trim37Q6PCX9 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC18.33■□□□□ 0.52
Trim37Q6PCX9 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trim37Q6PCX9 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC18.33■□□□□ 0.52
Trim37Q6PCX9 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.33■□□□□ 0.52
Trim37Q6PCX9 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim37Q6PCX9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trim37Q6PCX9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim37Q6PCX9 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.33■□□□□ 0.52
Trim37Q6PCX9 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim37Q6PCX9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim37Q6PCX9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim37Q6PCX9 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim37Q6PCX9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trim37Q6PCX9 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim37Q6PCX9 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
Trim37Q6PCX9 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim37Q6PCX9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim37Q6PCX9 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Trim37Q6PCX9 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim37Q6PCX9 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim37Q6PCX9 Gm1401-201ENSMUST00000122048 772 ntBASIC18.32■□□□□ 0.52
Trim37Q6PCX9 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim37Q6PCX9 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Trim37Q6PCX9 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Trim37Q6PCX9 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim37Q6PCX9 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.32■□□□□ 0.52
Trim37Q6PCX9 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim37Q6PCX9 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim37Q6PCX9 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim37Q6PCX9 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim37Q6PCX9 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim37Q6PCX9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim37Q6PCX9 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.32■□□□□ 0.52
Trim37Q6PCX9 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim37Q6PCX9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim37Q6PCX9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Trim37Q6PCX9 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim37Q6PCX9 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.31■□□□□ 0.52
Trim37Q6PCX9 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Trim37Q6PCX9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim37Q6PCX9 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim37Q6PCX9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim37Q6PCX9 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim37Q6PCX9 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim37Q6PCX9 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim37Q6PCX9 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.31■□□□□ 0.52
Trim37Q6PCX9 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.31■□□□□ 0.52
Trim37Q6PCX9 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Trim37Q6PCX9 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.31■□□□□ 0.52
Trim37Q6PCX9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Trim37Q6PCX9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim37Q6PCX9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Trim37Q6PCX9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.31■□□□□ 0.52
Trim37Q6PCX9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim37Q6PCX9 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Trim37Q6PCX9 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Trim37Q6PCX9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim37Q6PCX9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim37Q6PCX9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trim37Q6PCX9 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim37Q6PCX9 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim37Q6PCX9 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC18.3■□□□□ 0.52
Trim37Q6PCX9 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim37Q6PCX9 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.3■□□□□ 0.52
Trim37Q6PCX9 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim37Q6PCX9 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim37Q6PCX9 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim37Q6PCX9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim37Q6PCX9 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim37Q6PCX9 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim37Q6PCX9 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.3■□□□□ 0.52
Trim37Q6PCX9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim37Q6PCX9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim37Q6PCX9 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim37Q6PCX9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Trim37Q6PCX9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim37Q6PCX9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms