Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smchd1Q6P5D8 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Smchd1Q6P5D8 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smchd1Q6P5D8 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smchd1Q6P5D8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Smchd1Q6P5D8 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smchd1Q6P5D8 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.11■□□□□ 0.49
Smchd1Q6P5D8 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.11■□□□□ 0.49
Smchd1Q6P5D8 Gm25745-201ENSMUST00000174945 133 ntBASIC18.11■□□□□ 0.49
Smchd1Q6P5D8 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smchd1Q6P5D8 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.11■□□□□ 0.49
Smchd1Q6P5D8 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Smchd1Q6P5D8 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.11■□□□□ 0.49
Smchd1Q6P5D8 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smchd1Q6P5D8 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smchd1Q6P5D8 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.11■□□□□ 0.49
Smchd1Q6P5D8 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smchd1Q6P5D8 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smchd1Q6P5D8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Smchd1Q6P5D8 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smchd1Q6P5D8 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smchd1Q6P5D8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smchd1Q6P5D8 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smchd1Q6P5D8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smchd1Q6P5D8 Mir8098-201ENSMUST00000184011 137 ntBASIC18.11■□□□□ 0.49
Smchd1Q6P5D8 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Smchd1Q6P5D8 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smchd1Q6P5D8 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Smchd1Q6P5D8 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smchd1Q6P5D8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Smchd1Q6P5D8 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smchd1Q6P5D8 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smchd1Q6P5D8 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.1■□□□□ 0.49
Smchd1Q6P5D8 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Smchd1Q6P5D8 Gm11452-201ENSMUST00000122376 690 ntBASIC18.1■□□□□ 0.49
Smchd1Q6P5D8 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smchd1Q6P5D8 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.1■□□□□ 0.49
Smchd1Q6P5D8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smchd1Q6P5D8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Smchd1Q6P5D8 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smchd1Q6P5D8 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smchd1Q6P5D8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Smchd1Q6P5D8 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Smchd1Q6P5D8 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Smchd1Q6P5D8 Mir5126-201ENSMUST00000175513 77 ntBASIC18.1■□□□□ 0.49
Smchd1Q6P5D8 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Smchd1Q6P5D8 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smchd1Q6P5D8 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smchd1Q6P5D8 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smchd1Q6P5D8 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smchd1Q6P5D8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smchd1Q6P5D8 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.09■□□□□ 0.49
Smchd1Q6P5D8 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Smchd1Q6P5D8 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.09■□□□□ 0.49
Smchd1Q6P5D8 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.09■□□□□ 0.49
Smchd1Q6P5D8 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Smchd1Q6P5D8 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smchd1Q6P5D8 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smchd1Q6P5D8 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Smchd1Q6P5D8 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smchd1Q6P5D8 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smchd1Q6P5D8 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smchd1Q6P5D8 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smchd1Q6P5D8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smchd1Q6P5D8 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.08■□□□□ 0.49
Smchd1Q6P5D8 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.08■□□□□ 0.49
Smchd1Q6P5D8 Gm36967-201ENSMUST00000193814 266 ntBASIC18.08■□□□□ 0.49
Smchd1Q6P5D8 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.08■□□□□ 0.49
Smchd1Q6P5D8 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.08■□□□□ 0.49
Smchd1Q6P5D8 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smchd1Q6P5D8 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smchd1Q6P5D8 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smchd1Q6P5D8 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smchd1Q6P5D8 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Smchd1Q6P5D8 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smchd1Q6P5D8 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
Smchd1Q6P5D8 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smchd1Q6P5D8 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.08■□□□□ 0.48
Smchd1Q6P5D8 Gm15165-201ENSMUST00000118140 502 ntBASIC18.08■□□□□ 0.48
Smchd1Q6P5D8 Gm44771-201ENSMUST00000206975 626 ntBASIC18.08■□□□□ 0.48
Smchd1Q6P5D8 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Smchd1Q6P5D8 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.08■□□□□ 0.48
Smchd1Q6P5D8 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smchd1Q6P5D8 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smchd1Q6P5D8 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Smchd1Q6P5D8 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smchd1Q6P5D8 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smchd1Q6P5D8 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Smchd1Q6P5D8 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smchd1Q6P5D8 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smchd1Q6P5D8 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.07■□□□□ 0.48
Smchd1Q6P5D8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smchd1Q6P5D8 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smchd1Q6P5D8 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Smchd1Q6P5D8 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smchd1Q6P5D8 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Smchd1Q6P5D8 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Smchd1Q6P5D8 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smchd1Q6P5D8 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smchd1Q6P5D8 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms