Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.76■□□□□ 0.27
Casc4Q6P2L7 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Casc4Q6P2L7 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Casc4Q6P2L7 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.75■□□□□ 0.27
Casc4Q6P2L7 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Casc4Q6P2L7 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Casc4Q6P2L7 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Casc4Q6P2L7 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Casc4Q6P2L7 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Casc4Q6P2L7 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Casc4Q6P2L7 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Casc4Q6P2L7 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Casc4Q6P2L7 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.75■□□□□ 0.27
Casc4Q6P2L7 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Casc4Q6P2L7 Gm26039-201ENSMUST00000158152 144 ntBASIC16.75■□□□□ 0.27
Casc4Q6P2L7 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.75■□□□□ 0.27
Casc4Q6P2L7 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Casc4Q6P2L7 Gm21559-201ENSMUST00000220638 855 ntBASIC16.75■□□□□ 0.27
Casc4Q6P2L7 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Casc4Q6P2L7 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Casc4Q6P2L7 Gm8587-201ENSMUST00000076538 843 ntBASIC16.75■□□□□ 0.27
Casc4Q6P2L7 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Casc4Q6P2L7 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Casc4Q6P2L7 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Casc4Q6P2L7 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Casc4Q6P2L7 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Casc4Q6P2L7 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Casc4Q6P2L7 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Casc4Q6P2L7 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Casc4Q6P2L7 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Casc4Q6P2L7 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Casc4Q6P2L7 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Casc4Q6P2L7 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Casc4Q6P2L7 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.74■□□□□ 0.27
Casc4Q6P2L7 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Casc4Q6P2L7 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Casc4Q6P2L7 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.74■□□□□ 0.27
Casc4Q6P2L7 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Casc4Q6P2L7 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Casc4Q6P2L7 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Casc4Q6P2L7 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Casc4Q6P2L7 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Casc4Q6P2L7 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Casc4Q6P2L7 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Casc4Q6P2L7 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Casc4Q6P2L7 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Casc4Q6P2L7 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Casc4Q6P2L7 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Casc4Q6P2L7 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Casc4Q6P2L7 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Casc4Q6P2L7 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Casc4Q6P2L7 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Casc4Q6P2L7 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Casc4Q6P2L7 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.73■□□□□ 0.27
Casc4Q6P2L7 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Casc4Q6P2L7 Phf7-203ENSMUST00000226565 1971 ntBASIC16.73■□□□□ 0.27
Casc4Q6P2L7 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Casc4Q6P2L7 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Casc4Q6P2L7 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Casc4Q6P2L7 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.73■□□□□ 0.27
Casc4Q6P2L7 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Casc4Q6P2L7 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Casc4Q6P2L7 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Casc4Q6P2L7 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Casc4Q6P2L7 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Casc4Q6P2L7 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.73■□□□□ 0.27
Casc4Q6P2L7 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Casc4Q6P2L7 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Casc4Q6P2L7 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Casc4Q6P2L7 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Casc4Q6P2L7 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Casc4Q6P2L7 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Casc4Q6P2L7 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Casc4Q6P2L7 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Casc4Q6P2L7 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Casc4Q6P2L7 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Casc4Q6P2L7 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Casc4Q6P2L7 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Casc4Q6P2L7 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Casc4Q6P2L7 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Casc4Q6P2L7 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Casc4Q6P2L7 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Casc4Q6P2L7 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Casc4Q6P2L7 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Casc4Q6P2L7 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Casc4Q6P2L7 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Casc4Q6P2L7 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Casc4Q6P2L7 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Casc4Q6P2L7 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.72■□□□□ 0.27
Casc4Q6P2L7 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.72■□□□□ 0.27
Casc4Q6P2L7 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Casc4Q6P2L7 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Casc4Q6P2L7 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Casc4Q6P2L7 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Casc4Q6P2L7 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Casc4Q6P2L7 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Casc4Q6P2L7 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Casc4Q6P2L7 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Casc4Q6P2L7 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.72■□□□□ 0.27
Casc4Q6P2L7 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 324.5 ms