Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdzrn3Q69ZS0 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdzrn3Q69ZS0 Gm10052-201ENSMUST00000168019 960 ntBASIC20.22■□□□□ 0.83
Pdzrn3Q69ZS0 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pdzrn3Q69ZS0 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdzrn3Q69ZS0 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdzrn3Q69ZS0 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pdzrn3Q69ZS0 Gm7729-201ENSMUST00000050143 801 ntBASIC20.22■□□□□ 0.83
Pdzrn3Q69ZS0 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC20.22■□□□□ 0.83
Pdzrn3Q69ZS0 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdzrn3Q69ZS0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdzrn3Q69ZS0 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdzrn3Q69ZS0 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Pdzrn3Q69ZS0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdzrn3Q69ZS0 Haglr-201ENSMUST00000100000 2085 ntBASIC20.22■□□□□ 0.83
Pdzrn3Q69ZS0 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdzrn3Q69ZS0 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdzrn3Q69ZS0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
Pdzrn3Q69ZS0 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdzrn3Q69ZS0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdzrn3Q69ZS0 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Pdzrn3Q69ZS0 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC20.21■□□□□ 0.83
Pdzrn3Q69ZS0 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdzrn3Q69ZS0 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdzrn3Q69ZS0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Pdzrn3Q69ZS0 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pdzrn3Q69ZS0 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC20.21■□□□□ 0.83
Pdzrn3Q69ZS0 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pdzrn3Q69ZS0 Gm18195-201ENSMUST00000207604 706 ntBASIC20.21■□□□□ 0.83
Pdzrn3Q69ZS0 AC159301.1-201ENSMUST00000225130 1182 ntBASIC20.21■□□□□ 0.83
Pdzrn3Q69ZS0 Gm5867-201ENSMUST00000063197 592 ntBASIC20.21■□□□□ 0.83
Pdzrn3Q69ZS0 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pdzrn3Q69ZS0 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdzrn3Q69ZS0 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pdzrn3Q69ZS0 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Pdzrn3Q69ZS0 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdzrn3Q69ZS0 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Pdzrn3Q69ZS0 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdzrn3Q69ZS0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdzrn3Q69ZS0 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdzrn3Q69ZS0 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdzrn3Q69ZS0 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdzrn3Q69ZS0 Gm26596-201ENSMUST00000180464 2655 ntBASIC20.2■□□□□ 0.82
Pdzrn3Q69ZS0 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pdzrn3Q69ZS0 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pdzrn3Q69ZS0 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC20.2■□□□□ 0.82
Pdzrn3Q69ZS0 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pdzrn3Q69ZS0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pdzrn3Q69ZS0 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pdzrn3Q69ZS0 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pdzrn3Q69ZS0 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pdzrn3Q69ZS0 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Pdzrn3Q69ZS0 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC20.2■□□□□ 0.82
Pdzrn3Q69ZS0 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pdzrn3Q69ZS0 Gm13216-201ENSMUST00000117145 591 ntBASIC20.2■□□□□ 0.82
Pdzrn3Q69ZS0 Gm11452-201ENSMUST00000122376 690 ntBASIC20.2■□□□□ 0.82
Pdzrn3Q69ZS0 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pdzrn3Q69ZS0 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Pdzrn3Q69ZS0 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Pdzrn3Q69ZS0 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC20.2■□□□□ 0.82
Pdzrn3Q69ZS0 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pdzrn3Q69ZS0 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Pdzrn3Q69ZS0 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pdzrn3Q69ZS0 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pdzrn3Q69ZS0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pdzrn3Q69ZS0 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Pdzrn3Q69ZS0 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdzrn3Q69ZS0 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdzrn3Q69ZS0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdzrn3Q69ZS0 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdzrn3Q69ZS0 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdzrn3Q69ZS0 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdzrn3Q69ZS0 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdzrn3Q69ZS0 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pdzrn3Q69ZS0 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pdzrn3Q69ZS0 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pdzrn3Q69ZS0 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdzrn3Q69ZS0 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdzrn3Q69ZS0 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pdzrn3Q69ZS0 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC20.19■□□□□ 0.82
Pdzrn3Q69ZS0 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Pdzrn3Q69ZS0 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC20.19■□□□□ 0.82
Pdzrn3Q69ZS0 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC20.19■□□□□ 0.82
Pdzrn3Q69ZS0 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC20.19■□□□□ 0.82
Pdzrn3Q69ZS0 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdzrn3Q69ZS0 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdzrn3Q69ZS0 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pdzrn3Q69ZS0 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pdzrn3Q69ZS0 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pdzrn3Q69ZS0 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pdzrn3Q69ZS0 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pdzrn3Q69ZS0 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC20.18■□□□□ 0.82
Pdzrn3Q69ZS0 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC20.18■□□□□ 0.82
Pdzrn3Q69ZS0 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pdzrn3Q69ZS0 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pdzrn3Q69ZS0 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pdzrn3Q69ZS0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pdzrn3Q69ZS0 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pdzrn3Q69ZS0 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pdzrn3Q69ZS0 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms