Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Six2Q62232 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Six2Q62232 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Six2Q62232 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Six2Q62232 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Six2Q62232 Gm6433-201ENSMUST00000118634 875 ntBASIC17.64■□□□□ 0.41
Six2Q62232 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Six2Q62232 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Six2Q62232 Gm29707-201ENSMUST00000196325 491 ntBASIC17.64■□□□□ 0.41
Six2Q62232 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Six2Q62232 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Six2Q62232 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Six2Q62232 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Six2Q62232 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Six2Q62232 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Six2Q62232 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Six2Q62232 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Six2Q62232 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Six2Q62232 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.63■□□□□ 0.41
Six2Q62232 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Six2Q62232 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Six2Q62232 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Six2Q62232 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Six2Q62232 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.63■□□□□ 0.41
Six2Q62232 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.63■□□□□ 0.41
Six2Q62232 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.63■□□□□ 0.41
Six2Q62232 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Six2Q62232 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Six2Q62232 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Six2Q62232 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Six2Q62232 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Six2Q62232 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Six2Q62232 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Six2Q62232 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Six2Q62232 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Six2Q62232 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Six2Q62232 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.62■□□□□ 0.41
Six2Q62232 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Six2Q62232 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Six2Q62232 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Six2Q62232 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Six2Q62232 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Six2Q62232 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Six2Q62232 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.62■□□□□ 0.41
Six2Q62232 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.62■□□□□ 0.41
Six2Q62232 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Six2Q62232 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Six2Q62232 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Six2Q62232 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Six2Q62232 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Six2Q62232 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Six2Q62232 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Six2Q62232 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Six2Q62232 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Six2Q62232 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Six2Q62232 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Six2Q62232 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Six2Q62232 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Six2Q62232 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Six2Q62232 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Six2Q62232 Dancr-204ENSMUST00000132389 2347 ntBASIC17.61■□□□□ 0.41
Six2Q62232 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Six2Q62232 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Six2Q62232 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Six2Q62232 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Six2Q62232 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Six2Q62232 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Six2Q62232 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Six2Q62232 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Six2Q62232 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Six2Q62232 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.61■□□□□ 0.41
Six2Q62232 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.61■□□□□ 0.41
Six2Q62232 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Six2Q62232 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Six2Q62232 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Six2Q62232 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Six2Q62232 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Six2Q62232 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Six2Q62232 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Six2Q62232 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Six2Q62232 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Six2Q62232 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.61■□□□□ 0.41
Six2Q62232 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.61■□□□□ 0.41
Six2Q62232 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Six2Q62232 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.61■□□□□ 0.41
Six2Q62232 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Six2Q62232 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Six2Q62232 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six2Q62232 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.6■□□□□ 0.41
Six2Q62232 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six2Q62232 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.6■□□□□ 0.41
Six2Q62232 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.6■□□□□ 0.41
Six2Q62232 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six2Q62232 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six2Q62232 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Six2Q62232 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Six2Q62232 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.6■□□□□ 0.41
Six2Q62232 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.6■□□□□ 0.41
Six2Q62232 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six2Q62232 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms