Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ctr9Q62018 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ctr9Q62018 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ctr9Q62018 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ctr9Q62018 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ctr9Q62018 Gm18669-201ENSMUST00000216049 778 ntBASIC19.48■□□□□ 0.71
Ctr9Q62018 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ctr9Q62018 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ctr9Q62018 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ctr9Q62018 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.48■□□□□ 0.71
Ctr9Q62018 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ctr9Q62018 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Ctr9Q62018 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ctr9Q62018 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ctr9Q62018 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ctr9Q62018 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ctr9Q62018 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Ctr9Q62018 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ctr9Q62018 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ctr9Q62018 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.47■□□□□ 0.71
Ctr9Q62018 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Ctr9Q62018 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ctr9Q62018 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ctr9Q62018 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Ctr9Q62018 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ctr9Q62018 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ctr9Q62018 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ctr9Q62018 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ctr9Q62018 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19.47■□□□□ 0.71
Ctr9Q62018 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.47■□□□□ 0.71
Ctr9Q62018 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ctr9Q62018 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ctr9Q62018 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Ctr9Q62018 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctr9Q62018 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctr9Q62018 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctr9Q62018 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ctr9Q62018 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctr9Q62018 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctr9Q62018 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ctr9Q62018 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctr9Q62018 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctr9Q62018 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctr9Q62018 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctr9Q62018 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctr9Q62018 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ctr9Q62018 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.7
Ctr9Q62018 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Ctr9Q62018 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctr9Q62018 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctr9Q62018 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctr9Q62018 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Ctr9Q62018 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctr9Q62018 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctr9Q62018 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctr9Q62018 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctr9Q62018 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctr9Q62018 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctr9Q62018 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.45■□□□□ 0.7
Ctr9Q62018 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Ctr9Q62018 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Ctr9Q62018 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctr9Q62018 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctr9Q62018 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Ctr9Q62018 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctr9Q62018 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctr9Q62018 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctr9Q62018 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctr9Q62018 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Ctr9Q62018 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Ctr9Q62018 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.44■□□□□ 0.7
Ctr9Q62018 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC19.44■□□□□ 0.7
Ctr9Q62018 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.44■□□□□ 0.7
Ctr9Q62018 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Ctr9Q62018 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctr9Q62018 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctr9Q62018 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.44■□□□□ 0.7
Ctr9Q62018 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctr9Q62018 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctr9Q62018 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctr9Q62018 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ctr9Q62018 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctr9Q62018 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Ctr9Q62018 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctr9Q62018 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctr9Q62018 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctr9Q62018 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctr9Q62018 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctr9Q62018 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ctr9Q62018 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctr9Q62018 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctr9Q62018 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ctr9Q62018 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ctr9Q62018 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ctr9Q62018 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ctr9Q62018 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Ctr9Q62018 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ctr9Q62018 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Ctr9Q62018 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19.42■□□□□ 0.7
Ctr9Q62018 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms